| mature miRNA: GCGAGCTTCTCGAAGATGTCG species: Mimulus guttatus var. nasutus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|238098632|gb|GO973153.1|GO973153 CCIH837.g1 CCIH Mimulus nasutus SF floral buds (L) Mimulus guttatus var. nasutus cDNA clone GCGAGCTTCTCGAAGATGTCG EST sequence (targeted fragment marked with yellow): ACCTCCCTCAACAGCTGGCTCAAGCTAAACCTCATCCCAATCGAGAGCAGCTTAAAGGAAAAAGTCAGCTCACCCCCACACACCCCCACCCCCCCCAATCCACCCCCTCCTCCGATCATGGCACGACCTCCTCGAGAAGCTCCCCGATGAGGTGGCAAAAACGGCTATTTCGTCTTTTGCTGCAGTGATAAAAACAATAAGTATCCATCAAGAGGAAGAAATGAAGATGAAGGAGAAGTACGAAGAAACGAGGAGGGAGTACTATCGGAAGAAGCAGTCTTTCGAAGAGTGGTACCAAAAGTACATGCAGAGGAGGGCGGGGCAAAATGACGAAAACGACCCTGATAAGGGGGTGAAGGACCCTGTCTCGGAGAGGCAGTTTGTGGTGGATAGTTTGAAGAAGAGGTTAGACGAAGAAATGGAGGAGCATCAAAAGATGTGTGTTCAAGTGAGGGAGAAGTCGCTCGGGAGTTTGAAGATTCGTTTGCCCGAGCTTTTTAGGGCGCTTTCCGATTATGCCCACTCGTGTTCTGATGCTTATCAAAGGCTGAGATTGATTATAATGTCACAAGGAAATAAATAGGGGGTTTCTTTCTTTAATTATGTGTTTTGTGGAGGTTTTATTTATTTATTTATGAACTTGTTGTATAATGTTGCAGTTTTTCTTGCAAGATTTTGTTGTATGTGAG | |||||||||
gi|238101104|gb|GO972782.1|GO972782 CCIH8192.g1 CCIH Mimulus nasutus SF floral buds (L) Mimulus guttatus var. nasutus cDNA clone GCGAGCTTCTCGAAGATGTCG EST sequence (targeted fragment marked with yellow): ATCAAACAAACCCTCATTCTAAACCAAAACCCAGCAACAAAAAAAAAAAATGGCTCCCAGGGCAGCAGAAAAGAAACCCGCCGAGAAGAAGCCAGCGGCAGAGGAGAAGAAAACCACCGCAGCAGAAAAGTCTCCAGCGGCGGCGGCAGAGAAGAAGCCGAAGGCCGGCAAGAAGCTCCCGAAGGACGCCGGCAAGGCGGCGGTGGGCGGAGTAGAGAAGAAGAAGAAGAGGACGAAGAAGAGCGTGGAAACTTACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTCCACCCAGATATCGGCGTCTCCAGCAAAGCCATGGGTATAATGAACAGCTTCATTAACGACATCTTCGAGAAGCTCGCCGGAGAATCTTCCCGATTGGCCAGGATCAATAAGAAGCCCACCATCACTTCCCGGGAGATTCAGACCGCCGTCCGGTTGGTCTTGCCCGGCGAGCTTGCTAAACATGCTGTTTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGTTCTTAGATTTTCTCTGGGTTTTGTTGCTCTGTTGTAATTAGGACTGTTTGTTTTCCTGCTTTTCTTTTTTTATTTCCTCTGCTGTTTAAATAGGTTTATTAAATCCTGTATTCGTTTGCTTAACGAATTAATTCCACGGATCACTTTTCCTTCTTC | |||||||||
gi|238081821|gb|GO953301.1|GO953301 CCII6556.g1 CCII Mimulus nasutus SF floral buds (H) Mimulus guttatus var. nasutus cDNA clone GCGAGCTTCTCGAAGATGTCG EST sequence (targeted fragment marked with yellow): GCAAGAAGTGGTCGATGCCTTTTTATACAACTTTATGCCGTACGTACGGCCCCGATAACTACATTACTGTGAAAGACGACGAGCTGATTAGGGCTTTGGTGAAGAAGGGTGCGAATTACGACATGGATTCTGACGACGAGGAGTGGCTGTCTGAATTTAATGACGAGTTGTGCGGTGGGATGGAATTGCAAGAACCTGTTTCGCCAGAGTGTTTTGAGTTGGTTATCGATGCTCTTGAGAAAGGTGTTCATTGTAATCCTGACGAGAATTTTGAGGAGCTCGCTGCGTATGATTTTTGTATGCATTTGGAGAGGAGAGAGGTTATTGAGGCGATTCGTAATTATTGGGTTAAGAAGCGGAAACAGAAGCGGTCGGCTTTAGTGAGGGTTTTCCAGCTTTACCAGCCTCGAAGAATTCAAGTGATACCAAAGTCTGTTTTTCGAAAGAAAAGATCGTTCAAACGTCAAGCAAGTCAGGGTGGGAGAGGCAAACAGCGACCTATCTTGCCCCGCAATAGCAGCCGAACGGGATGCTTTGGAACAACAAAACAACGCGCAAAAATTACAAGAAGCAAAAGCTGCTGCAGAAAGATTCGAAGCATTGGCAGTTGAAAAACGACAAAGAGCACAAATGCTAATGGAGAATGCCGACTTGGCTACTTATAAAGCAATATTGGCTCTTAGAATTGCAGAAGCAGCTCAGCTTTCCGAGGGTTCAGAAACAGTTGCTTCGTTTTTTGCCGGTTAACCCGAATCGTGTAATAGTTTGT | |||||||||
gi|238076436|gb|GO949984.1|GO949984 CCII4733.g1 CCII Mimulus nasutus SF floral buds (H) Mimulus guttatus var. nasutus cDNA clone GCGAGCTTCTCGAAGATGTCG EST sequence (targeted fragment marked with yellow): AGGAAAAAGTCAGCTCACCCCCACACACCCCCACCCCCCCCAATCCACCCCCTCCTCCGATCATGGCACGACCTCCTCGAGAAGCTCCCCCGATGAGGTGGCAAAAACGGCTATTTCGTCTTTTGCTGCAGTGATAAAAACAATAAGTATCCATCAAGAGGAAGAAATGAAGATGAAGGAGAAGTACGAAGAAACGAGGAGGGAGTACTATCGGAAGAAGCAGTCTTTCGAAGAGTGGTACCAAAAGTACATGCAGAGGAGGGCGGGGCAAAATGACGAAAACGACCCTGATAAGGGGGTGAAGGACCCTGTCTCGGAGAGGCAGTTTGTGGTGGATAGTTTGAAGAAGAGGTTAGACGAAGAAATGGAGGAGCATCAAAAGATGTGTGTTCAAGTGAGGGAGAAGTCGCTCGGGAGTTTGAAGATTCGTTTGCCCGAGCTTTTTAGGGCGCTTTCCGATTATGCCCACTCGTGTTCTGATGCTTATCAAAGGCTGAGATTGATTATAATGTCACAAGGAAATAAATAGGGGGTTTCTTTCTTTAATTATGTGTTTTGTGGAGGTTTTATTTATTTATTTATGAACTTGTTGTATAATGTTGCAGTTTTTCTTGCAAGATTTTGTTGTATGTGAGAAAAACTTGGTTTGTTGTAGACTTTTTGTATTTAAAAAAAGTTTTATTATT | |||||||||
gi|238085743|gb|GO961465.1|GO961465 CCIH2492.g1 CCIH Mimulus nasutus SF floral buds (L) Mimulus guttatus var. nasutus cDNA clone GCGAGCTTCTCGAAGATGTCG EST sequence (targeted fragment marked with yellow): CTCAAATCCAAAAATCAAAAATCCAAATACCTTTCGAAATTTATCAGATTCAATGGTGAAGGCAGATAAGAAGCCAGCAGAGAAGAAGCCCGCAGCCGAGAAAGCGCCGGCGGCAGAGAAATCTCCGGCGGAGAAGAAGCCCAAGGCCGGGAAGAAGCTACCGAAGGAAGCCGGCGGCGCCGCCGCCGGAGAGAAGAAGAAGAAGCGGACGAAGAAGAGCGTGGAGACGTACAAGATCTATATCTTCAAGGTGCTGAAGCAGGTCCACCCAGACATCGGCGTTTCCAGCAAAGCCATGGGAATAATGAACAGCTTCATCAACGATATTTTCGAGAAGCTGGCTCAGGAATCGGCTCGGCTGGCTCGGTACAACAAGAAGCCGACCATCACTTCTCGCGAGATCCAGACCGCCGTGAGGCTGGTGTTGCCCGGCGAGTTGGCGAAGCACGCCGTTTCTGAAGGAACAAAGGCCGTCACCAAATTCACCAGCTCTTGAAATTGCTGATGTCTTTAGATCTGAAATTAGGGTTTTTGTTTTTTTGTTCTTTTTGATCTGAAATTTAGTTTCTTATTTTGTTTACCTTTGTTTTTTTTTTTTTGAGAGATTTTGTATACCTTTTGAATGTAAAGAACTCTGTTTGCTAGACAATTATCAACCTTC | |||||||||