| mature miRNA: GCTGGAGGATTCGACGGTGCT species: Mimulus guttatus var. nasutus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|238082880|gb|GO957005.1|GO957005 CCII8613.b1 CCII Mimulus nasutus SF floral buds (H) Mimulus guttatus var. nasutus cDNA clone GCTGGAGGATTCGACGGTGCT EST sequence (targeted fragment marked with yellow): CTTTCAAGAATTAAATTAATAAAAAAAATAATATATAATGGCTAATATGGCCGGAGGAGAGCAAGACCTTCTGTCGACGGAAATAGTCAACCGCGGAATCGAGTCGTCGGGTCCCGACGCCGGGTCGATGACGTTTTCCGTCAGGGTGCGTCGGAGGCTGCCGGACTTTGTTAACTCCGTTAACTTGAAGTACGTGAAGTTGGGTTACCATTACTTGATCAATCACGGCGTTTACCTGGCGACGGTTCCGGTGCTGGTTCTGGTGTTCGGGGCGGAGGTGGGCAGCCTGAGAAGGGAGGAGCTGTGGCGGAAGATCTGGGACACCACCGCCGGATACGATCTCGCCTCCGTCGTCGCTTTCTTAGCTCTCTTCGTATTCACTCTCTCCGTTTACTTCATGTCTCGCCCTCGCTCCATTTATCTTCTTGATTTTGCTTGCTTCAAACCCACTGATGATTTGAAGGTAACGAAAGAGGAGTTCATCGAACTAGCCCGGAAATCGGGCAAATTCGACGATGAAAGCCTCGAATTTCAGAGAAGGATCCTCGAATCCTCCGGCATCGGCATGAAACATACGTCCCGAAATCCATCGGCTCGCCGGAAAACACCGCCACCATGAAAGAAGGCCGAGCCGAAGCCTCCGCCGTCATCTTCGGAGCACTGGACGAGCTCTTCGAGAAAACGCAGTCCCGGCCGAAAGACGTCGGAGTCCTCGTTCTGAACTGCAGCCTCTTCAATCCGACGCCGTCGCTCTCGCCATGGTGATCAACCACTATAGATGAGGGGAACATTCTGAGCTTCAATTTGGGTGGGATGGGATGC | |||||||||
gi|238083984|gb|GO955517.1|GO955517 CCII7804.b1 CCII Mimulus nasutus SF floral buds (H) Mimulus guttatus var. nasutus cDNA clone GCTGGAGGATTCGACGGTGCT EST sequence (targeted fragment marked with yellow): AAAAAATAATATATAATGGCTAATATGGCCGGAGGAGAGCAAGACCTTCTGTCGACGGAAATAGTCAACCGCGGAATCGAGTCGTCGGGTCCCGACGCCGGGTCGATGACGTTTTCCGTCAGGGTGCGTCGGAGGCTGCCGGACTTTGTTAACTCCGTTAACTTGAAGTACGTGAAGTTGGGTTACCATTACTTGATCAATCACGGCGTTTACCTGGCGACGGTTCCGGTGCTGGTTCTGGTGTTCGGGGCGGAGGTGGGCAGCCTGAGAAGGGAGGAGCTGTGGCGGAAGATCTGGGACACCACCGCCGGATACGATCTCGCCTCCGTCGTCGCTTTCTTAGCTCTCTTCGTATTCACTCTCTCCGTTTACTTCATGTCTCGCCCTCGCTCCATTTATCTTCTTGATTTTGCTTGCTTCAAACCCACTGATGATTTGAAGGTAACGAAAGAGGAGTTCATCGAACTAGCCCGGAAATCGGGCAAATTCGACGATGAAAGCCTCGAATTTCAGAGAAGGATCCTCGAATCCTCCGGCATCGGCAATGAAACATACGTCCCGAAATCCATCGGCTCGCCGGAAAACACCGCCACCATGAAAGAAGGCCGAGCCGAAGCCTCCGCCGTCATCTTCGGAGCACTGGACGAGCTCTTCGAGAAAACGCAGTCCGGCCGAAAGACGTCGGAGTCCTCGTTCTGAACTGCAGCCTCTTCAATCCGACGCCGTCGCTCTCCGCCATGGTGATCAACCACTATAGATGAGGGGAAACATTCTGAGCTTCAATTTGGGTGGGATGGGATGCAG | |||||||||
gi|238084408|gb|GO951621.1|GO951621 CCII5647.g1 CCII Mimulus nasutus SF floral buds (H) Mimulus guttatus var. nasutus cDNA clone GCTGGAGGATTCGACGGTGCT EST sequence (targeted fragment marked with yellow): CTAATTTATTCCTCTAATCAAAAAAATTAAACCATTAATTTACATACAGTGTATATGTAATGGCGCCGAGGCCTAGGGCGGCGGCGGAAACCGGCCAACACGAAACGCATTTTCGAGGCGTGAGGAAGAGGCCTTGGGGTAGGTACGCCGCTGAAATCAGGGATCCGGGCAAGAAGAGCCGCGTGTGGCTCGGCACATTCGACACGGCGGAGGAGGCAGCCAGAGCGTACGACAACGCCGCCCGCCGATTCCGCGGCTCCAAGGCCAAGACGAATTTTCCTCCGCCCGATACGGACATCAACAAAGCCAATGGTTTCTTCACCAATATCCGCAGCCCCAGCCAGAGCAGCACCGTCGAATCCTCCAGCAGGGAGACATTCCCGCCGCCTCCGCCGCCGGCGGCGGCGGTGCTGGATTCAACCCTCTTGGACCTCACCATCGGCCCCCGACGAATGAGATTCCCCTTCCAGCAGAACCGCCATCTCCGCCCTGACGCCCCTGTTCCCGCCGCCGCCGCCGCCGGTCAATTCGTTAAGATTATGCCGCTTCATTCCACGATGCTGAACCTCCGTCCGGAATCCCGGCAGGAAATAGTAGAGCTAATGAACGGAATGC | |||||||||
gi|238078849|gb|GO952829.1|GO952829 CCII6301.b1 CCII Mimulus nasutus SF floral buds (H) Mimulus guttatus var. nasutus cDNA clone GCTGGAGGATTCGACGGTGCT EST sequence (targeted fragment marked with yellow): AAAAAAAACCAGTCTTTAATTAGCTTGAGAGGACGATGATGATGGCTTCCATGGCGGAACTGATGACTCAAATGGGGTCGGCAGTCGCCGGCATAATGGTTGCCTACGCGATGTTCCAGAACTACTTTCCGTACGAACTCCGGCGGCCCATAAAACGGTACGCCGAAAAAGCCATGTCTTTCATCTACCCTTACATCCATATCAGCTTCTCCGAGTACCACGGCGACGACTTCCAGCGGAGCAAAGCCTACGCCTCCATAGAGCGCTACCTGAACGCCAACTCCACCAAGCAGGCCAAACGCCTCCAGGCCAACGTCCTCCGCGACAGCGAATCCATCGTCCTCACCATGGCCAATTACGAAGAGGTCACCGACGAATTCTCCGGCGTCAAGCTCTGGTGGTCCTCCAACAAGTCCACCCGCACCCAGCAGTCAATTTCCTTCTTCCCCAGAGAAGACGAGAAGAAGTTCTTCACCCTAACCTTCCACCGCCGCCACCGCGAAGCCATCACCACCAGGTATTTGACACATGTCCTCAATGAAGGTAAAGCCATCACCATCAGTGAACGCCGCCGTAAACTCTACACCAACAACAAGAACGAAGGCTACAGCTACCGCCGCAACCTCTGGACCCACGTCATGTTCGACCACCCCGCCACCTTCGATACCCTAGCCATGGAGCCCACTAAAAAGCAAGAAATCATAGACGACCTCATCCATTTCACACAGTCGAAGACTACTACGCAAAGGTCGGCAAAGCG | |||||||||
gi|238081004|gb|GO956376.1|GO956376 CCII8272.b1 CCII Mimulus nasutus SF floral buds (H) Mimulus guttatus var. nasutus cDNA clone GCTGGAGGATTCGACGGTGCT EST sequence (targeted fragment marked with yellow): ATTAAATTAATAAAAAAAATAATATATAATGGCTAATATGGCCGGAGGAGAGCAAGACCTTCTGTCGACGGAAATAGTCAACCGCGGAATCGAGTCGTCGGGTCCCGACGCCGGGTCGATGACGTTTTCCGTCAGGGTGCGTCGGAGGCTGCCGGACTTTGTTAACTCCGTTAACTTGAAGTACGTGAAGTTGGGTTACCATTACTTGATCAATCACGGCGTTTACCTGGCGACGGTTCCGGTGCTGGTTCTGGTGTTCGGGGCGGAGGTGGGCAGCCTGAGAAGGGAGGAGCTGTGGCGGAAGATCTGGGACACCACCGCCGGATACGATCTCGCCTCCGTCGTCGCTTTCTTAGCTCTCTTCGTATTCACTCTCTCCGTTTACTTCATGTCTCGCCCTCGCTCCATTTATCTTCTTGATTTTGCTTGCTTCAAACCCACTGATGATTTGAAGGTAACGAAAGAGGAGTTCATCGAACTAGCCCGGAAATCGGGCAAATTCGACGATGAAAGCCTCGAATTTCAGGAGAAGGATCCTCGAATCCTCCGGCATCGGCAATGAAACATACGTCCCGAAATCCATCGGCTCGCCGGAAAACACCGCCACCATGAAAGAAGGCCGAGCCGAAGCCTCCGCCGTCATCTTCGAGCACTGGACGAGCTCTTCGAGAAAACGCAGGTCCGGCCGAAAGACGTCGGAGTCCTCGTTCTGAACTGCAGCCTCTTCAATCCGGACGCCGTCGCTCTCCGCCATGGTGATCAACCACTATAAGATGGAGGGGAAACATTCTGAGCTTCAATTGGGGTGGGATGGGATGCAGC | |||||||||