| mature miRNA: AACTGAGAATGCCATTGGTG species: Pinus taeda database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|61774183|gb|DN629383.1|DN629383 EST980199 Subtracted pine embryo library, Lib_C Pinus taeda cDNA clone PTABD92, mRNA sequence AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): ACCCGAACATGGACCAGCATCATGTAAGCATGCCTCAGCAAAGGCATTATCAGTTTGCAAAAATGCCCTTCTAGCAGCCCTCTCAATATGCAAAGGAAAATCAGCATCTTTGACAATAAGACTAGGCAATTTGTCACAAGCAAACTGTGCAGCATGTTTTCCTCCATGTCCATCAAACACCCCATAGAAGGCCCCGGGACCTTCTCCAAGGGGAGGAAATCCAAACTTGTCTGCAAAACTGTCAATGCACACATGTGTATCTTCCATACAATCACGATCACCTATATCAGCCCAGCCTCCAGAACGAAGGGCTGGAATAAAATTTGTCGCAACATTTTCTCTCTTCTTTACTGCCTCCACAGAATCACCCTTTTTCATAAGAGAGGCATGGCGGACGAGAGAAGCGTGATATGCAGAAGGTGAATGGCCGATGCTAACACAGTGGCGCAGGGCGGTGCCTCGAGGATTAGGCGGTCGCTCGGCGATGAATTTTTGTTGATCGGTATCTGCCTCGGCGTCCGCGTCGGAAGTGGGCTTCAGCTCTTCCTGCTGCTCCCCAACCAGAGCCTTGTCGGTGTCAACGATCATTTCTGTTACCACAGCAATTACCGCTCAATCAATCACTGTCACACTTCTGAATGCATGAAGGCCTTCAGCTTACCAAGCTGCTCTGTTCTGCTCTGGTTCACACACAGTTCGGCCTGTCGGTTATATCCCGGTTTTCTTGCACCTCTTCGCTCGCTCTTCTCCTGATTGATTGAGGTGTCTG | |||||||||
gi|67048202|gb|DR070473.1|DR070473 RTDK1_13_C01.g1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_13_C01_A029 5', mRNA sequence AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GCTGCATTTGAAGGATCTACAGCATTTTGAGGATCAATCGCGGTTTACTGGTTCGAACGTTTAACCACGATTTTGAGCTACAAAAGAAAGCGCTTACGGCATTCTCAGTTCCAATCGCGATTTCTCGTTATATTTGGAGCATTTTAAGTATAAGTTGGGATTTCAAGCTCAAAAAGGGTTCATTTTGAGCTTCGATCGTGATTTCAGCTTCAAACAAGGTATTTACAGCATCTTTCTCCAGAGTATAGTGAGCTTCAATTGAAATTGTTTTAGATCTTTATAGAATGAAGAAGAAGAATTAGAAAAAAATCAATAATTTTCGGCGCCTGAACCGTCAGATTTAACTCGCCGTTGCAAAAATGGAAGGAGAAAATGTTTCTTGCTTTCTTTCCGATAAAGAGCTACCGACAGAGATCGAAGACAAAGAGAAGCACGATTTTCCTACCGATCAGACTGCAGAGGCCGATACTGCGAGTCCGGCAGTCCAAAATGGAGGAAAAGTAACCGCGAAACCGTCAAATGCTGCAGCAAAAAGCCTGCGAACGAGCAAGACGAGCAAGCCCGTGTCAAAGCTCTCCACTGCAGCTAAAGCATCCGCTACATTACGAGGCTCAACGGTCAGAGCGGCACCCATCCCTCCGGGTTCGCGATCCTCGCCTTCCACTGCTTCCAGAACCAAAGCGATCAGTGACAATGGCAATTCACCGGCTGATAACGGAGTTCAGGCGAGCCTTACGAGCGCTTCC | |||||||||
gi|70976111|gb|DR744895.1|DR744895 RTCU1_25_D05.g1_A029 Roots plus added copper Pinus taeda cDNA clone RTCU1_25_D05_A029 5', mRN AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GAATTGACAAGAGAGAATTATGTAACATTTAAAAGATTAATGGATGTACCTTGTAAAAAGTATTTTCCAATCAAAAATACCTGAATAACATAAATAACAGATCACAAAAATACCTGAATAGCATAAATTTAAATAGTCCTAGCACACAAAACTGTGTTTTAATACTCGGAGGTTCCTCAATCTTGACAGCATCCGACATGCAAACATAGCAAAGCTCTACAGCTTGTCTTCGAACTCTGACAAGGGAGTCATACTCTCCTTAAGACCCTTCCTCTTACGGATATCAGTCACAAGCTGCCCAGCTTGGGAACCAGGTTCCAATGGATCAGATCCCATCATATCCCAGTGGTCAAACACACATTGAGGGAAAGCCTGGCCAGAAGTTGCGGCACGGAGAGTGCTTGAGAATCCGAATGATTCAACAACCGGCAGATATGCCTTGATGTTGTATAGTGGAGTACCTGGCCTCTGCATTTCTTCAAAAACATGACCTCTCTTCTGGTTCAGCACACCATAAATACCACCAAGGGCATTCTCAGGAGCCTGAATCTCAACAAGATATACTGGCTCAAGAAGCCGTGGTTTGGCAGTAAGCTGAGATGCATACATAACCCTTCTGGCCGTTGGGATCACCTGGCCACCTCCTCTATGGATAGCATCACCT | |||||||||
gi|7580014|gb|AW697523.1|AW697523 ST64A02 Pine TriplEx shoot tip library Pinus taeda cDNA clone ST64A02, mRNA sequence AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): ATTATGGCCGGGGGCATTCTCAGTTAGTCAATCAATAAGTACATGAATAGAGTTATTTCCGTGAAATTTCCACATTTGCAGCTACTAGGTATTATTCTCCTAACTTATGCAGTTTATTTATCTTTTGTAAATTACTTTACGGCAAATAACGAACAAATGAAAATGCTGCGGAAAATAAAAGCACTGAAATTGAGAAAATAATGTACACACACAGTAAATCTGACACCAGTTTTTTTNNACGATTGTCCTGTTGTAGCGGCTGCAACAATCCTCCAAAATTTTGCCTTAGCTTTGTTTTGNNGCCTCCCCACCAACCATCCTTAGCAGCATGTCTTGCATTGCCCNNNTACATATGCTTTCAGTTGAGTTTCTNGNNNNNNCAGCTTTTGTTTGCTAACTTGTTTTCTTTTCANCCGCAAGATGACATCCCGTGACTNGNT | |||||||||
gi|68256140|gb|DR388542.1|DR388542 RTHG1_28_H08.g1_A029 Roots plus added mercury Pinus taeda cDNA clone RTHG1_28_H08_A029 5', mR AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GATTTCTGGTCTGCAAAATTCGGTTGCATATTGAGAAGCTATTTTTTTATACATACCATTTTTATGGTTGTTTCATTTTTTTATTTTGAGCTTATCAAATTTTAGAATATTCTTAAAATCTACAATAAAACGTAAGTTTAGAAACTGTGATTTAGCTATTATCATGTTAAAAGGGAAAGGAGTAGTTGAATGCTCAGACATGCCCGAGAAGATGCAGAGCCATGCCATGCAGTGTGCGTCACAAGCTCTGGACTTGTATGATGTCTCTGACTGCACAAGTATAGCTCGTCATATTAAAAAGGAATTCGACAGTATCTATGGAGCTGGATGGCAGTGCGTTGTGGGGATGCACTTCGGCTGTTTTTTCACTCATGACAAAGGCAGTTTCATCTATTTCTGCTTGGAAACGCTGCATATCTTGATGTTCAAGCGAGCCTAATCCATGGCCACCACTGTAATTAATTGCCCGGCTGTGTATTTCTTCTCATGTGGATAAGCTTTGGAAGAATATATATATATATATAGTTTAGTTGTATAAAAATGAGTATGAATGCAGACTGTCATTCATCCATTGCATTCTGAGTTAGCAAGCAGTGAGAGATACAAGCCCAATTTAGTTGGGTTCTGTGACTTACGCTAAAAGACATTCATGAACATTTTGTACAGTACATGTTCAAAAATCATTTATTCCCT | |||||||||
gi|67558737|gb|DR099382.1|DR099382 STRR1_55_E10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_55_E10_A033 3', mRN AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GATAATACATTTTAGAAACGGGGTATATGTTTTGCCTATTTTTACCCGGCTAGGCGGGATCTTATCTGGTACCGCAGGTCAAGGGAGGATAGGTCTCGCGACCCTCCTTGTCCTATGCAGGGGTATTCTTTATCCTAAAAATGAATAATGCAGAAGAGTATAGATCCTAAAACATCCCTGTTAATATGCAGAGGGGGGGTTGCAACAACGAGAGGGTTTCGCATACAAAATCTGCAATCAGGCTTTTCTTCAGACAGCTTGGGGAGGTGGAAGGCCTGTGGATCGGGAATAAAACTTCCCCGATTAACCATAGGCTCATGTTCCAGCACTCCAGTCTCTGTCTACCTGCCTACAGATTATGAGGCATGACTTTGTATTTGATTCAACTTAAGTGAAGATGAACAACATAATGAAATTTTGAGGACTTTTGAATACGTAATTTTTGCTATTCCAGAGAAAGAATGCTGAAACATGACTACACACAATGGCATTCTCAGTAAACCACAATACAGGTCTCATACTGAAACTTGATGACAGCCATGGAGGGTCATGATCCGGGATCCCATTTAACCTTTCAACATACAACTTAGTGACAGAAGGCTGCACCAATTCTTGATAAAACAGACACAAGTAATCATTTTTGACTGTAGTCTTAGTACCTTAGTATCTCCCATGGTCGGACTTCTAAAGAAATAAACTAAACATGTGATAATGTTGATGCACACAAGGC | |||||||||
gi|48946782|gb|CO173910.1|CO173910 NDL1_40_G07.b1_A029 Needles control Pinus taeda cDNA clone NDL1_40_G07_A029 3', mRNA sequence AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GAAGAATTTGAAATCTTTAAACAAACAATTTTGTAATATAGTTAAATAAGTTACAAGTATTCAACTCCAATAAAAGTATTTTTGCACACTAGTTTAAAATAGCATAACAAACCATCATATGAATAAACTGTACATATACATTCATAGAAGGCTTAATCAAAACAGGTATAGCCCTAACGCATTCTACATATATAGCAATGATGCATATGGCATAGGAATTACACTCGTAGCTTCAATTAGTCTACTATCATAAAACACGTGAATGATTTACGAATCCTGAAAAATTAAGATATGCCAGCAATCTTCCAAGATGAAGATTTATCAATCTGTTTGCTTTAGGTAGATTACGTGTATTTCCTTGTATCTTCCCTTTTCTTTCCTTCTAACGTAATGCAAATCCTACGGGGACCACCATAGTCTCGATGCTCATTTAACCAGATTCCCTGCCAGATACCAAGATGAAATCTTCCTGCTGTCACTGGAATTGTCAGTGAGCATCCCATCATCGATGACTTTACATGAGCAGGCATGTCATCATAACCTTCATCTAGATGACGGTAATGGTTTCCCTCCGGAACAATCCTGTTCAAGGCATCTTCCATGTCAAGTGGAACATCACTACTTGCATTCTCATTTATAGTCAAGCTGGCTGAAGTATGTAGAATGAACAAGTTTGCGAGACCCACTTCAAATTGTCTTATTTCTGGAACCGCTTCATATATATACCGAGTTATTATATG | |||||||||
gi|74156691|gb|DT625424.1|DT625424 EST1159699 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMAP45 5' end, AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GATGCAGAGAAAGAGAATCGCCTCAGGCAATCGTACTGCTCTTTTATCAAACGCCTGGGCATGAATTTAGGGCTGCCCCAGGTGACCATCGCAACAGCAACCATACTGTGCCACCGATTCTATATCCGCCAGTCTCATAGCCGCAACGACAGATACACAATCGCAACCAGCTGCCTGCTCCTCGCCAACAAGCTCACGGCGGCGCAGCGAAAAATATTTGAAGATCTGACTCTGCTTTCCTACCAAGTCCTCCATGAAGATGCAGACTCGGCCACTGCTAAACTCATAAAAGTTCCCAAATTTTTGCAGCAGAGGCAACAATTATTATTGAAGGCCGAGCAGTTTGTTCTCCGTACGCTTAACTTCGATCTCGAGATCGAAAACCCTTACAAACCCCTCGTCTCTGCCCTCAAAAAATTCAATGCTGAACAATGGCATTCTCAGTTTGCACAGGTCTCCTGGAACTTTGTGAATGATGCATTGATGACAACGGTGTGTCTCCAGTTCGAACCCCGCCGAGTCGCTGCTGCGGCTTTCTATCTGGCAGCCAGGTGTCTCCGAGTCAAGTTGCCAGCGGATACAGAGAACCCATGGTGGCTGGAGTTCGATATATCTATTTCTCAACTTGGAGATATCTGCAGTCAACTGGTCGAGTTTTATGGAACGAGAAGTTTGTACACTCCCAGTCCATCACCAAATGCTCTTCAGAGCTGGAGTAGCTCTCCTGCTGGTAATATTAATGCCGACTATACACCCACAAGTACAAGTACGATTACAAGCTTCTCCGTTGGTTCCAGGCGGGAATAATGGCAGGGATTGAAGGGCTTTGTTTCAATTTTCATCAATTATTTCAGAACACGGATGATCTTAGTTTCAATAATCGGAATTGAAAAAGATCAAATTTGTTCAATATTGTCTGCATATTCATACTGAACCAAACTTACTGTACTGATAATGTTTACTATTAAAATATAA | |||||||||
gi|67193533|gb|DR080071.1|DR080071 RTFEPL1_20_B11.b1_A029 Roots plus added iron Pinus taeda cDNA clone RTFEPL1_20_B11_A029 3', m AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GAAAGAATAACTTCAGACACCAAAAGAGGTATAACTTACAGTTCATCATTCTCTACTGGGTTAATGCCCCAAGGCACATCTTCACAGTGCTTCACGTACGGAAAGACTTTTCCAGTGTCTATACCTTTTTTAGCTTGGCAATCATAAAATGGAGGTGCATGAAAGCATGGCTCCATTGACATGACTTTACGACATGGTGGATCTGCAGCAGTGTCATTCTCAGGTTTAAACAAAATCCAAGGTTTTGTGCCTCCAAGACCTTGGGCAACATACCCAAATGTTGACCATGGGCTAGTTATAAGTACATCGCATAAAGATAGAAGATACATTTCTGCCCAGGCTTTCATATTGTGAGATTGCTTCTCAGTCTGCTGCCATTCTTCATGGCTAGGCTGGTAGACACTTACAAGCTGTCCATCCAGTGTCGGGTGCTCCCAATACATGCTTTTAATTCTTTCATAGTAACCAGAATGTAGAGAGGTGACTAATACCACATAAGGCTTTTTCATGTCCCCATTGAGATAAGTATCTTCCTGCGCCTCATCATTAATCAATACATTGGGTAATACTCCATTTTTCAGACTGCAAGCCACAACCTGCTCTGATATATGTGAGAAAAAACCAGGATCAAATGTCCTGATCTGTATGCCTATTCTTTGCTTTGCATAGGCCATATAAGATTGATAAAAACGGGTAATCAAACCCCAAACTCGATTGGAAGGGTGGAATAGGTACCGTCCCAAATGATGGAAA | |||||||||
gi|34343146|gb|CF385626.1|CF385626 RTDR1_5_H09.b1_A015 Loblolly pine roots recovering from drought DR1 Pinus taeda cDNA clone RT AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GCTCCTCTCCTCTCTTCTGCCTCCATAACCGAACATTGCACTCTCAGCCAACTTGTTTTTCCTCTGCTCCAGGCCCCGGGTTTCGAACACATAACCTTCTGCTGCACGAAAAGTACTCGCGAATGGCACTCTCAGTCCAACTGTAGCAGCGACCCCTTCTGTTGCCCCCACGTCCACAGGTTGCCGCCATGAAGATCCGCGTGGGGCGCAGGTTCCCCAAGATCAAAGCTTTGATCTCCGTGCGTCTGAGGGTTTGCAGGCTCATTGGTTCTCTGGTTCGCAAGATTTCGACCCTCATGTCCCAGGATCGAACCTCGCCAAGTTCCTCGTTTGTTTGCCTCCAGCGACCTCAGGTGGCCAGTAGCCCCCTCCCGGTTGGACCCCGCGACCTGGTGGCGTTCGGCCGTCGCCGCAAGATGGCTCCAAAGGGGTGCGTGGCAGTTTATGTGGGAGAAGAGCGGCAGCGGTTTGTGATCCCCATTATGTATTTGAATCATCCATTCATTACCAAGCTTCTCGCAAATGAAGGGGAGGGAGAGTGGGCTTACAGTCACAAAGGGCCGCTCACGGTTCCCTGTGACGTGGACGATTTCGAGCAGCTGAAGTGGCTTGTTGAC | |||||||||
gi|74161592|gb|DT631523.1|DT631523 EST1146454 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMF968 3' end, mRNA AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): CGGCCGGGGGAGTTCGAATCCGTGGCAGTTCGTTCGTGCATCTTGTTCACAGCACTGATCGATAGCATGGCGACCAATGCCATTCTTAGTAACAGAATTCTTTCTTCTGGGGTGCATCCTTCTCAAATCAGCACGTCGGATAAGAGAATAGCAAGGGATTTACCGAAACAGTGCCTGTTGGCGAGACCAATAGCGTTGAATGCGAAGCAATGGGGAAGAAGAAGCCGGCTTGTTGGGAGAGCGGCGGCAAAGGATATTGCCTTCGATCAGGTGTCCCGCGTTGCATTGCAGACAGGCATTGACAAATTGGCTGATGCGGTCGGGGTTACGTTGGGACCTAGAGGTATGCATGCATTATTTGAAGATAAAACTAAAAATATGCAACGGGCACCATTGTTTGTTATCGCATATCATGTCCCTTTTCGCTTCCCGCTAGAAGCCTTTTATCCCATCGAACCGTTTACTGATGGCTCAGTTGGTCTATGGAATCTTGTACCTGCGTTCCAGGAGTTTGTTTTTGATGTTTCTGAGTCAGATTTCGCTGTCATATCAGGATTCAATGGGTTGTATTGTATCTAGTGTGCAAGATTACTTTTCGACATTCC | |||||||||
gi|61777739|gb|DN631217.1|DN631217 EST982033 Subtracted pine embryo library, Lib_C Pinus taeda cDNA clone PTAC628, mRNA sequence AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GCAAGTTAGTGATTAGATTACTCATGTCATTTTCAGTTACCTCCTATAGCCATAGCGAGTAGAATGGTGAGGGATTGAATTATGAATGCGTAGTTTGATCTTAGTTTCATTTTATGCAATTTAAATATCAAATTAGTCAATTTGTTTATGATTACATCCTATAGCCAGAGCGAGTCGAATGGGGAGGGGTCAGAATATGAGTTGATGTAATATGATTTAGTTTACTTTGCTTACAACTTTTGAATTGTTTTGAGTTCAGTTTTCTTTTTATACAGCAGCAAGGATACTGGGTTTCATAGTCACTAGCTCACTGCCCGCGT | |||||||||
gi|67047563|gb|DR069860.1|DR069860 RTDK1_9_H01.g1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_9_H01_A029 5', mRNA sequence AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GAGGATCGATTCGCATTTTGCCTAAAGTTTGCTGCATTTGAAGGATCTACAGCATTTTGAGGATCAATCGCGGTTTACTGGTTCGAACGTTTAACCACGATTTGAGCTACAAAAGAAAGCGCTTACGGCATTCTCAGTTCCAATCGCGATTTCTCGTTATATTTGGAGCATTTTAAGTATAAGTTGGGATTTCAAGCTCAAAAAGGGTTCATTTTGAGCTTCGATCGTGATTTCAGCTTCAAACAAGATTTAACTCGCCGTTGCAAAAATGGAAGGAGAAAATGTTTCTTGCTTTCTTTCCGATAAAGAGCTACCGACAGAGATCGAAGACAAAGAGAAGCACGATTTTCCTACCGATCAGACTGCAGAGGCCGATACTGCGAGTCCGGCAGTCCAAAATGGAGGAAAAGTAACCGCGAAACCGTCAAATGCTGCAGCAAAAAGCCTGCGAACGAGCAAGACGAGCAAGCCGGTGTCAAAGCTCTCCACTGCAGCTAAAGCATCCGCTACATTACGAGGCTCAACGGTCAGAGCGGCACCCATCCCTCCGGGTTCGCGATCCTCGCCTTCCACTGCTTCCAGAACCAAAGCGATCAGTGACAATGGCAATTCACCGGCTGATAACGGAGTTCAAGCGAGCCTTACGAGCGCTTCCACCTCCAAGGCTGCTGTTAGTGCGAATTCTGTCGCCAAACGGAATAGTGTCGGGACACCG | |||||||||
gi|70774208|gb|DR685732.1|DR685732 EST1075809 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAB724 3' end, mRNA AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): CTTCGTTGGATCAGCCGAGATCGAATGTATGCTTAAACCCTACAATACAGTGGTTATTTTTGCTCTGTTTATCTATCTTTCGTGTGTTTCTTGGCACATTTGAGGTGAAATGAAGATAGAAATCAGACTTAAAATTAGCTATGATGCATAGTATCATCAACTACTGTTGTTGTATATGGTGTGTTTTTAACCCCAGTGACTGATACCGCCATCAAAATATGGGACGGATCAGAGTGGAGAACAGATACCGCCATAAGAGTATGGAACGGATCAGGCTGGAGAACAGATGCCGCCATAAGAGTATGGGATGGATCAAGCTCGAGAACAGATACCACCATAAAAGTATGGGATGGATCAGGTAGACAATAGAATGAAAGTGTATAAATCATCACTTTAGAGATCTGGGAACAGATATTGTGGGTTTGTCAGCATTTGCATTTTCAGTTTAGAGATATGGGAAGAAATATTAAGAATTAGTAGAAGTCTTCAGATCTGGGAAGAGATATTGTGCATCAAGAATGGTCTTTATGATTAGTGCAGCGTTGTTTCTATTTGGCGTGGGCGGTTGCTCAAACATGAAGCCACTGCAAGAATTCCATGGGGATTTTAAAATCTCCAACACGTTACTTCCAAATTTTAAGTTTATTAGAGTTTGAAATGTTACTGCAAATTAGCTATATGTGGAT | |||||||||
gi|48929575|gb|CO159034.1|CO159034 FLD1_10_H08.g1_A029 Root flooded Pinus taeda cDNA clone FLD1_10_H08_A029 5', mRNA sequence AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GGGCAACTTCAATTTATTCGCTGAATTTTAATGTCCTGACAGCAAGATGGCTCAAACAATTTCCTTTTCATACTCAGTTTGAATTTTGAAGTCCTGCCTACAAGATGGTTGAAACAATTGCCTTTTCATACTTAGTGAAGTCTGGGAAGTCTGGTCTCTCCCTTTGAGACTCAATACGTAGCAAAAAGAAATGGCAGCTTTGATGATTTCTGATCCTACTATAAATAAAATACTATCCTCAATATTGACAGCATCCGACAGGCAAACATAACAAAGCTCTACAGCTTGTCTTCGTACTCTGACAAGGGAGTCATACTCTCCTTAAGACCCTTCCTCTTACGTATATCGATCACAAGCTGACCAGCTTGTGACCCAGATTCCAATGGATCAGAGCCCATCATATCCCAGTGGTCAAACACACATTGAGGAAAAGCCTGGCCGGAAGTTGCAGCGCGGAGAGTGCTTGAGAATCCGAATGATTCAACAACCGGCAGATATGCCTTGATGTTGTATAGTGGAGTACCTGGCCTCTGCATTTCTTCAAAAACATGACCTCTCTTCTGGTTCAACACACCATAAATACCACCAAGGGCATTCTCAGGAGCCTGAATCTCAACAAGATACACTGGTTCAAGAAGCCGCGGTTTGGCAGTAAGCTGAGATGCATACATAACCCTTCTGGCCGTTGGGATAACCTGGCCACCTCCTCTATGGATAGCATCAGTGTGCAAAACCACGTCACAAACCTCAAAGC | |||||||||
gi|66983813|gb|DR060246.1|DR060246 RTNIT1_26_D09.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone RTNIT1_26_D09_A029 5', mRNA AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): AGCACTGATCGATTGCATGGCGACCAATGCCATTCTTAGTAACAGAATTCTTTCTTCTGGGGTGCATCCTTCTCAAATCAGCACGTCGGATAAGAGAATAGCAAGGGATTTACCGAAACAGTGCCTGTTGGCGAGACCAATAGCGTTGAATGCGAAGCAATGGGGAAGAAGAAGCCGGCTTGTTGTGAGAGCGGCGGCAAAGGATATTGCCTTCGATCAGGTGTCCCGCGTTGCATTGCAGACAGGCATTGACAAATTGGCTGATGCGGTCGGGGTTACGTTGGGACCTAGAGGTCGTAATGTTGTGTTAGATGAATTTGGAGTTCCAAAAGTTGTTAATGATGGAGTTACAATTGCTCGTGCTATTGAACTTCCTGATGCAATGGAAAATGCAGGAGCAGCTTTGATCCGGGAGGTTGCAAGTAAGACCAATGATTCAGCAGGTGATGGGACAACTACTGCATCTGTTTTAGCACGGGAAATTATAAAGCTGGGACTTTTGAATGTCAGTTCAGGAGCCAATCCAGTTTCCTTAAAAAAGGGAATTGATAAAACTGTGCAGGGGCTTGTTGAGGAGCTGAAAACAAAGTCCAGACCTGTAAAAGGACGGGAGGATATTAAAGCTGTGGCTTCAATATCGGCTGGAAATGATGATTTCGTAGGAACTATGATTGCTGATGCTTTAGATAAAGTTGGGCCTGATGGTGTTCTCTCTATAGAGTCTTCTTCATCTTTTGAAACTACTGTTACTGTTGAGGAGGGAATGGAGATTGATAGGGGTTATATATCTCCCCAG | |||||||||
gi|67958395|gb|DR161900.1|DR161900 RTFE1_14_C09.g1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_14_C09_A029 5', mRNA seque AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): CACTCAACCATTCTCTCGCTCCTCTCCTCTCTTCTGCCTCCATAACCGAACATTGCACTCTCAGCCAACTTGTTTTTCCTCTGCTCCAGGCCCCGGGTTTCGAACACAGAACCTTCTGCTGCACGAAAAGTACTCGCGAATGGCACTCTCAGTCCAACTGTAGCAGCGACCCCTTCTGTTGCCCCCACGTCCACAGGTTGCCGCCATGAAGATCCGCGTGGGGCGCAGGTTCCCCAAGATCAAAGCTTTGATCTCCGTGCGTCTGAGGGTTTGCAGGCTCATTGGTTCTCTGGTTCGCAAGATTTCGACCCTCATGTCCCAGGATCGAACCTCGCCAAGTTCCTCGTTTGTTTGCCTCCAGCGACCTCAGGTGGCCCGTAGCCCCCTCCCGGTTGGACCCCGCGACCTGGTGGCGTTCGGCCGTCGCCGCAAGATGGCTCCAAAGGGGTGCGTGGCAGTTTATGTGGGAGAAGAGCGGCAGCGGTTTGTGATCCCCATTATGTATTTGAATCATCCATTCATTACCAAGCTTCTCGC | |||||||||
gi|74160132|gb|DT630064.1|DT630064 EST1154476 Subtracted pine embryo library, Lib_C Pinus taeda cDNA clone PIME459, mRNA sequenc AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): GCAAGTTAGTGATTAAATTACTCATGTCATTTTCAGTTACCTCCTATAACCATAGCGAGTAAAATGGTGAGGGATTGAATTATGAATGCGTAGTTTGATCTTAGTTTCATTTTATGCAATTTAAATATCAAATTAATCAATTTGTTTATGATTACATCCTATAGCCAGAGCGAGTCGAATGGGGAGGGGTCAAAATATGAGTTGATGTAATATGATTTAGTTTACTTTGCTTACAACTTTTGAATTGTTTTGAGTTCAGTTTTCTTTTTATACA | |||||||||
gi|34361495|gb|CF403078.1|CF403078 RTWW1_24_H06.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda cDNA clone RTWW1_24_H06 AACTGAGAATGCCATTGGTG EST sequence (targeted fragment marked with yellow): ATTTTGCCTAAAGTTTGCTGCATTTGAAGGATCTACAGCATTTTGAGGATCAATCGCGGTTTACTGGTTCGAACGTTTAACCACGATTTTGAGCTACAAAAGAGAGCGCTTACGGCATTCTCAGTTCCAATCGCGATTTCTCGTTATATTTGGAGCATTTTAAGTATAAGTTGGGATTTCAAGCTCAAAAAGGGTTCATTTTGAGCTTCGATCGTGATTTCAGCTTCAAACAAGATTTAACTCGCCGTTGCAAAAATGGAAGGAGAAAATGTTTCTTGCTTTCTTTCCGATAAAGAGCTACCGACAGAGATCGAAGACAAAGAGAAGCACGATTTTCCTACCGATCAGACTGCAGAGGCCGATACTGCGAGTCCGGCAGTCCAAAATGGAGGAAAAGTAACCGCGAAACCGTCAAATGCTGCAGCAAAAAGCCTGCGAACGAGCAAGACGAGCAAGCCCGTGTCAAAGCTCTCCACTGCAGCTAAAGCATCCGCTACATTACGAGGCTCAACGGTCAGAGCGGCACCCATCCCTCCGGGTTCGCGATCCTCGCCTTCCACTGCTTCCAGAACCAAAGCGATCAGTGACAATGGCAATTCACCGGCTGATAACGGAGTTCAGGCGAGCCTTACGAGCGCTTCCACCTCCAAGGCTGCTGTTAGTGCGAATTCTGTCGCCAAACGGAATAGTGTCGGGACACCGGCAGGAATTGCAGAGCGGCGGGCCAGCAGCGGTACG | |||||||||