| mature miRNA: TCAGAGTTTTGCCAGTTCCGCC species: Pinus taeda database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|67554994|gb|DR095639.1|DR095639 STRR1_22_C05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_22_C05_A033 5', mRN TCAGAGTTTTGCCAGTTCCGCC EST sequence (targeted fragment marked with yellow): CTGAAATGAATAGGTTGCTTTACAACATGAAGCTATTCAATCAATAGAACCTGAAATGGTGATTTAGTTCACATTACTAAGATTTGATGTTATTTTTAGACATCAGACCATCAAAATGATCACCAGTTACGTTTCAGACATAGAGGAGCATGTAAACTTGGTTATCTCGTTGACATGGCCCAAACTCAGGAGCTGCACCAAGGCTCAATGACTGAAAACCCTTCGCAAGGCTGTAGAAGTTTGTGATAGATGCAGAAGAAGAGAGCATGTCTCTTTTTCCCATTCCTGTGGTTGGCAAGGGTGGATCAGGCAAAACTCTGCTTCTAATCAGACTCTTCGACAACCAAAAGGTGCAGGCTCTTCGACAACCAAAAGGTGCAGGACCACCGAAGCATGGTTGAATCAAAGATTCTAGAGAAACAAGTTTGCCCTGTTCTTAGATGATGTATGGGGAGAAGGTGCCAAGTTTGCCCTTTTCTTAAATGATGTATGGGGAGAAGGTGCCAAGTTTGCCCTGTTCTTGGATGATGTATGGGAAGAAGGTGCCAAGTTTGCCCTGTTCTTAGATGATGTATGGGGAGAAGGTGCCAAATTGATGGAGGAATTGGGTCTACTCCAACTTCAAAGTTATTGCGACTTCAGGTATCACATAACACTTAACACTGTTAGTTGTGAGGTTCCCACAATAATAATGGGGGATATGATGAAATATTAGAATTGACAGTTGTAATCTGCTATTCAAATTTCTTCATATTGTGAGACTTAGCAATTTGCTATTCAAGTTGCTTCATA | |||||||||