| mature miRNA: AGAATCTTGATGATGCTGCAT species: Solanum tuberosum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|115273143|gb|EG011379.1|EG011379 SSBN003D10u SSBN Solanum tuberosum cDNA clone SSBN003D10, mRNA sequence AGAATCTTGATGATGCTGCAT EST sequence (targeted fragment marked with yellow): AGCCAATTCTCAACAATTTTGTTAATTTAGATACCAAAAAAGTAAAATAGTTCTAAAAAAAAACGAGAAAAAAAGTTCCTTGCAAGTTAAAAGTAAAGTAAAGTTTTTGCTCACAACAACTCTTGTGATTTCCTCACGCATCTCTTCACCTTCTTCACAAATTCCGCCCTATTATCCCTCCATTCCTTAGCCGCATCAACATTCGCCGGCGATTCATCATTCGGACTGGTAAGCATCGAAATTATACTCAGCATAATACTCTCCACCGTATGCACCGGCGTCCACCGCTCACTCGCCAGCTCATAATGATTCGGATCATCACCTGGTGGATGAAGAATCGATATACAAACCCTACCGTCAGAATAAACATTCGGATGCCAGATCTCCGTTGTGAATTTCACCGTCGAGCGGCCGCTGGACGATCGATCGATCGATCTTGTTATTTTCCAAGTTTGTTGGAGAGATGGAGCAGCAGTACTGTTATAACAAACCTAGTTCATCATCATCATGTAAAGCAGCTGATAGAAAAACAATTGAGAAAAACAGAAGAAATCAAATGAAGGATCTCTATATGAAGCTCAATTCACTTGTGCATCATGATCAACATTCTAAGGAACTTTTGTCACTGCCGGATCAACTGGAAGAAGCCGCGAATTACATAAAGAAACTGCAGATAGATTTGGAGAAAATGAGACTCAAA | |||||||||