miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TAGAAGATGACATTTTGTTGG
species: Solanum tuberosum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|221148101|gb|GH637881.1|GH637881 MiTFL30_13G04 Kuras, 8 week minituber Solanum tuberosum cDNA clone MiTFL30_13G04 5', mRNA se 

TAGAAGATGACATTTTGTTGG
||||||| |||||| |||||
ATCTTCTTCTGTAACACAACA

EST sequence (targeted fragment marked with yellow):
TGACTCATCACAACACAATGTCTTCTTCTAGTACTACTACTCTTCCATTATGCACCAACAAATCCCTCTCTTCTTCCTTCACCACCAACAACTCATCTTTCTTATCAAAACCCTCTCAACTTTCCCTCCACGGAAGGCGTAATCAAAGTTTCAAGGTTTCATGCAACGCCAACAATAATGTTGGCGAGCATGACAAAAACCTTGACGCTGTTGATAGGCGAAATGTTCTTTTAGGGTTAGGAGGTCTTTATGGTGCTGCTAATCTTGCACCATTAGCCTCTGCTTCTCCTATACCACCTCCTGATCTAAAATCTTGTGGTGTTGCCCATGTAAAAGAAGGT