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mature miRNA: TGACAGAAGATAGAGAGCAC
species: Solanum tuberosum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|160518277|gb|AM907209.1|AM907209 AM907209 Solanum tuberosum cv. Yungay leaf adult Solanum tuberosum cDNA clone 10H12, mRNA se

TGACAGAAGATAGAGAGCAC
||||||||||| ||| |||
ACTGTCTTCTACCTCGGGTG

EST sequence (targeted fragment marked with yellow):
GATATCGAATTCCATCAGGCAGAGGACGAGACAGAACGCAGAAAATGGCGCTCGACGACGACGATGGTGGCCTCTCAAGACTCCGGACGCCGCCATCGACGCAGTTACAGCTAGCGGTGCAGCACAACCGATACAGACAGCTCCTGCGCACGTTCCTCTCGTGGAAACGGCATGCGCAGACGCAGCGTGAGCGACGAAAACGAGTCGCCACTGCTTGTCTAGTGGGCTCCATCTTCTGTCAGCGAGAATACTGGTCGAGATGGAGGGCTTTTGTGGCCGTGAGACGTCAACTAAAGCTGGAGGAAGGACGGGAACACGAAAAGGAATCACTACTGGAGAAAGATCTGGACAACGGCGACTGTATTCGTTTTGATAAACAAGTAACGAGTGCAGCGTTAACTTCCGATGGAGGAGACAGTGAC



gi|78747936|gb|DV624339.1|DV624339 93859.1 Cold Sweetening C Solanum tuberosum cDNA clone 93859 5', mRNA sequence

TGACAGAAGAT-AGAGAGCAC
|||||.||||| | |||||||
ACTGTTTTCTAATGTCTCGTG

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTGAAGGGCAAAGTAGCTTACTATTAAAAGCATTTAAGAATTCTTTTGAGATGTGTCACAATAGAAATGAAATAGAACACTCAAAAGCCAAGGCAAATCTAATATCAGACCACTGGAAAAGTAAGTCCACAAAAACCTTCAACGAAATTGTGGGCCCTTCCTCAAGCGGGCAGCTTTCCAATAGTTTCCACCAACCCACAAGTTCCTGTTAACTCCATTCTTCTTTTTCTTGTGCTTGAAGCCCATTCTACCAGCAACCAGGAACTTGTTTCTGAACCGGTTCAGCCAATTCCTTCAATTCTTCCAATTAATCAGGACCCAGCTGGTGATTAATTGGAGGAAGATTATCCTGCAATTCCTTGGTTGGGGGGGTAACCATTGACAACCCATGTGTTTGCAGCAATTGATGCTTGAACTTTGGGGTTACTGAATTGGATAACAACATCCTCTTTGAAAATGTTGACTTCTTCAATAGCAGGAATGGCATTGACACCTATTCTTTTCAAGGTGCTCTGTAATCTTTTGTCATCAGTTGTAGTTGTCTTGTGTACGGCTTTCTTCTTTCTTCTCATGGTCCCCTTTCCACCAGTTCTAACCGAACCGGCCATCTTTTGCAACTTTTCTACATTCATCTTGTGAGGAGAAGACTGAGCTAAAAG