mature miRNA: TGACAGAAGATAGAGAGCAC species: Solanum tuberosum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|160518277|gb|AM907209.1|AM907209 AM907209 Solanum tuberosum cv. Yungay leaf adult Solanum tuberosum cDNA clone 10H12, mRNA se TGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): GATATCGAATTCCATCAGGCAGAGGACGAGACAGAACGCAGAAAATGGCGCTCGACGACGACGATGGTGGCCTCTCAAGACTCCGGACGCCGCCATCGACGCAGTTACAGCTAGCGGTGCAGCACAACCGATACAGACAGCTCCTGCGCACGTTCCTCTCGTGGAAACGGCATGCGCAGACGCAGCGTGAGCGACGAAAACGAGTCGCCACTGCTTGTCTAGTGGGCTCCATCTTCTGTCAGCGAGAATACTGGTCGAGATGGAGGGCTTTTGTGGCCGTGAGACGTCAACTAAAGCTGGAGGAAGGACGGGAACACGAAAAGGAATCACTACTGGAGAAAGATCTGGACAACGGCGACTGTATTCGTTTTGATAAACAAGTAACGAGTGCAGCGTTAACTTCCGATGGAGGAGACAGTGAC | |||||||||
gi|78747936|gb|DV624339.1|DV624339 93859.1 Cold Sweetening C Solanum tuberosum cDNA clone 93859 5', mRNA sequence TGACAGAAGAT-AGAGAGCAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTGAAGGGCAAAGTAGCTTACTATTAAAAGCATTTAAGAATTCTTTTGAGATGTGTCACAATAGAAATGAAATAGAACACTCAAAAGCCAAGGCAAATCTAATATCAGACCACTGGAAAAGTAAGTCCACAAAAACCTTCAACGAAATTGTGGGCCCTTCCTCAAGCGGGCAGCTTTCCAATAGTTTCCACCAACCCACAAGTTCCTGTTAACTCCATTCTTCTTTTTCTTGTGCTTGAAGCCCATTCTACCAGCAACCAGGAACTTGTTTCTGAACCGGTTCAGCCAATTCCTTCAATTCTTCCAATTAATCAGGACCCAGCTGGTGATTAATTGGAGGAAGATTATCCTGCAATTCCTTGGTTGGGGGGGTAACCATTGACAACCCATGTGTTTGCAGCAATTGATGCTTGAACTTTGGGGTTACTGAATTGGATAACAACATCCTCTTTGAAAATGTTGACTTCTTCAATAGCAGGAATGGCATTGACACCTATTCTTTTCAAGGTGCTCTGTAATCTTTTGTCATCAGTTGTAGTTGTCTTGTGTACGGCTTTCTTCTTTCTTCTCATGGTCCCCTTTCCACCAGTTCTAACCGAACCGGCCATCTTTTGCAACTTTTCTACATTCATCTTGTGAGGAGAAGACTGAGCTAAAAG |