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mature miRNA: GTTTTAGGTCGAGCTTCCTAT
species: Zamia vazquezii
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|166937458|gb|FD766926.1|FD766926 Zfi02b_31_C05_C017.b1 cDNA library derived from female gametophytes Zamia vazquezii cDNA clo

GTTTTAGGTCGAGCTTCCTAT
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CAAAATCCAGCTCGAAGGATA

EST sequence (targeted fragment marked with yellow):
CTTTTTTTTTTGGAGAAGCTAAATTGAATATCTAGGGCATATCATCTTTGAAAAAGGTATGAAGATGGATCTTACAAAGATACAAGCTATGTTATTGAAAATGCAAGTTTTAGGAAGCTTCCCGCATTTCAAAATCAAAGAAACTCTAAAACATAGGAAGCTCGACCTAAAACTAGGTCATTTCCAACTTGTTGGTTGGCATTTCTGACATCTAGCATGACCCCTCTAGGACCTACACAGGCCATGTGGGCCCATTACTTTTTTTTTTAAAATGATTTTTATTTTTCAAAGCTAAACACATTAAAAACTAAAAAATAAAGAGCCCAAACTACCAAGACCACTTGTGAAAGAAACATAGGCCAAACAAAAAAAAAAAGGGTCATGAATACCATGGGATAAAAACCACAATTGGCTCTTCCAAAGTAATTATAAATTGGAAAGCTCGTTCAACATTTGCCATTGCCTTCTTTTATGTTTATTTGCAAGTACCAAGTGTTTGGAGAGTGCCAAGTGGAGCTTGAAAATGGTTGGAGACTCACTCTTCTTCAACATTAGATAACGAGACACAAATCAAGAGGAAGCACAATTTATCCTCGATATGTGGGATCCAATTGTGGGACTTCTCCAAAAGACTGACAAAAATATTGCTTGCTTAGGAGATACTTATGATCACATGGATATACTAATTGAAAGAGTTAATGAT