miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TATGGTTCAATGCTGGTCTAT
species: Zamia vazquezii
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|166939903|gb|FD770016.1|FD770016 Zfi02b_73_G03_C017.b1 cDNA library derived from female gametophytes Zamia vazquezii cDNA clo

TATGGTTCAATGCTGGTCTAT
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ATACCAAGTTACGACCAGATA

EST sequence (targeted fragment marked with yellow):
ATGCCTTATTTTGAAGTAAATAGTAGTAAACTTGACAAATATTTGTCTATGATAAAAAGTCGCACAAAATCCCCAATAAACATAATAGACCAGCATTGAACCATAATATTCCCAACCTCTGATTAGAATCACCTCCACAGATCCATAGCCATAAAAATGCTGGTCAAAGTTCTCACAAAAGTTTCTGAAGTTCAGGCTCAAATTACTATCCACAATGCTGATAAAAAACATAGGAAAAAACCCAGTCATCAAATATGAATTCAAAATATACCCTGGATTCTGATCCTCAGTATTGAAGCACAAATGTTGACAGATATCCTATTCCTGTGAAATTAGCTTTTGCTTCAAATTCACAGCTAGAATTAATAGTCTCCATATACAATATGCTGACTGTCATCCATCTGACCATGCCTCACACTGTATATCCTCAAATCTTGTATCTCCAGTTCAAAATCTCAACTGAAATGAGATTATTTTTGAAAATCTGTAGCAGAATGTTGAAACCTTACATTGCACTTTCTTCACAAATGTACTCAATGGTCAAGGCCTCCCAAGTAGAAATTACTGATGCACATTAAAAGTTTTGGAGGCATACCATC