Parental gene:

Bra032519

Aliases:None
Description:AT1G04270 (E=1e-082) RPS15 | RPS15 (CYTOSOLIC RIBOSOMAL PROTEIN S15); structural constituent of ribosome
Organism:Chinese cabbage (Brassica rapa)
Coordinates:A09:36413826..36414786(+)


>Bra032519
ATGGCTGATGTGGAACCAGAGGTTGCAGCGGCAGGAGTCCCGAAGAAGAGGACGTTCAAGAAGTTTGCCTTCAAAGGAGT
CGATCTCGATGCTCTTCTCGATATGTCTACTGATGACCTTGTCAAGCTCTTCCCTTCTCGTATTCGCAGAAGGTTCTCTA
GAGGTTTGACCAGGAAGCCTATGGCTCTCATTAAGAAGCTCCGTAAGGCTAAAAGGGAGGCACCACAAGGTGAGAAGCCA
GAACCAGTGAGAACCCACCTCAGGAACATGATCATTGTCCCAGAGATGATCGGAAGCATCATTGGAGTGTACAACGGGAA
GACCTTTAACCAGGTCGAGATCAAGCCTGAGATGATTGGTCACTACTTGGCTGAGTTCTCCATCTCGTACAAGCCGGTTA
AGCACGGTAGGCCTGGTGTTGGTGCTACCCACTCCTCCAGGTTCATCCCCCTCAAGTGA

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT1G04270 ortholog_one2many 1 retrogene
retro_atha_20,
Arabidopsis lyrata fgenesh2_kg.1__358__AT1G04270.1 ortholog_one2many 1 retrogene
retro_alyr_8,
Medicago truncatula MTR_1g070450 ortholog_many2many 1 retrogene
retro_mtru_46,
Solanum tuberosum PGSC0003DMG400007336 ortholog_many2many 1 retrogene
retro_stub_80,
Solanum lycopersicum Solyc02g082000.2 ortholog_many2many 1 retrogene
retro_slyc_75,
Triticum aestivum Traes_2AL_52D3F9AF41 ortholog_many2many 1 retrogene
retro_taes_67,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_brap_20 65.58 97.37
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Download FASTA sequences of all Bra032519 retrocopies