Parental gene: | PSMG4, ENSBTAG00000031249 |
| Aliases: | None |
| Description: | None |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 23:50327385..50331704(-) |
>ENSBTAG00000031249
ATGGAGCGGCCGGCGGCTGCCGGGGGCGGGGACGTGTCCCTGCACAACTTCAGCGCGCGGCTTTGGGAGCAGCTCGTCCA
CTTCCACGTGATGCGGCTGACGGACTCGCTCTTCCTCTGGGTGGGGGCCACGCCGCACCTGCGCAACCTCGCCGTGGCCA
TGTGCACGCGCTACGACTCCATCCCCCTGTCCACCGCCCTCCTCGGGGACACGTCTGACACCATGTCCACCGGTCTCGCC
CAGCGCTTAGCCAGGAAGACCAGCAAGCAAGTCTTCGTCAGCTATAACCTTCCAAACACCAGCAGCAGCTTCGAGTTGCT
GGTAGAAAGCCGGATCAAGGAGGAAATGCAGGCCTTTCCGGAGAAGTTCTAG
ATGGAGCGGCCGGCGGCTGCCGGGGGCGGGGACGTGTCCCTGCACAACTTCAGCGCGCGGCTTTGGGAGCAGCTCGTCCA
CTTCCACGTGATGCGGCTGACGGACTCGCTCTTCCTCTGGGTGGGGGCCACGCCGCACCTGCGCAACCTCGCCGTGGCCA
TGTGCACGCGCTACGACTCCATCCCCCTGTCCACCGCCCTCCTCGGGGACACGTCTGACACCATGTCCACCGGTCTCGCC
CAGCGCTTAGCCAGGAAGACCAGCAAGCAAGTCTTCGTCAGCTATAACCTTCCAAACACCAGCAGCAGCTTCGAGTTGCT
GGTAGAAAGCCGGATCAAGGAGGAAATGCAGGCCTTTCCGGAGAAGTTCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 9 .27 RPM |
| SRP017611_kidney | 14 .40 RPM |
| SRP017611_liver | 13 .29 RPM |
| ERP005899_muscle | 62 .56 RPM |
| ERP005899_liver | 3 .03 RPM |
| SRP030211_testis | 19 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000014430 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000024906 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000039265 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000001005 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000006146 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1040 | 64.37 | 69.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000031249 retrocopies