Parental gene: | ENSCAFG00000002078 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 12:15348060..15396810(-) |
>ENSCAFG00000002078
CTTGGATTCCTTAGCACCACCACAGCTCAGCTAGAACAGAAGGCCTCAAATCTCATTGGCAAATACCACCATGTTGACCG
TGCCACCGGCCAGGTGCTAACCTGTGACAAGTGTCCAGCAGGAACCTATGTGTCTGAGCACTGTACCAACACGAGCCTGC
GTGTCTGTAGCAGTTGCCCTGTGGGGACCTTTACCAGGCATGAGAATGGCATAGAGAAATGCCATGACTGTAGTCAGCCA
TGCCCATGGCCAATGGTTGAGAAATTACCTTGTGCTGCCTTGACTGACCGAGAATGTGCTTGCCCACCTGGCATGTTCCA
GTTTAATGGTACCTGCGCCCCCCATACGGTGTGTCCTGTGGGGTGGGGTGTGCGGAAGAAAGGGACGGAGACCGAGGACG
TGCGGTGTAAGCAGTGTGCTCGGGGTACCTTCTCTGATGTGCCTTCTAGTGTGATGAAATGCAAAGCATACACAGACTGT
CTGAGTCAGAACCTGGTGGTGATCAAGCCGGGGACCAAGGAAGCAGACAATGTCTGTGGCACACTTCCGCCCTTCTCCAG
CACGACCTCACCTACCCCTGGTACAACCATCTTTTCACACCCGGAGCACATGGAATCCCATGAAGTCCCTTCCTCCACTT
ATGTTCCCAAAGGCATGAACTCAACAGAATCCAACTCTTCTGCCTCTGTTAGACCAAAGGTACCGAGTGGCATCCAGGAA
GGGACAGTCCCTGACAACACAAGCTCGGCAAGGGGTGAGGAAGGCATGAACAAGACCCTCCCAAACCTCCAGGTAGTCAA
CCACCAGCAAGGCCCCCACCACAGACACATCCTGAAGCTGCTGCCGTCCATGGAGGCAACTGGGGGCGAGAAATCCAGCA
CACCCATCAAAGGCCTCAAGCGGACTCACCCCAGACAGAACTTGCACAAGCATTTTGACATCAATGAACATTTGCCCTGG
ATGATTGTGCTTTTTCTGCTGCTGGTGCTTGTGGTGATAGTGGTATGCAGTATCCGGAAAAGCTCAAGAACTCTGAAAAA
GGGGCCCCGGCAGGACCCTAGCACCATTGTGGAAAAGGCAGGGCTGAAGAAATCCGTGACCCCAACCCAGAACCGGGAGA
AGTGGATCTACTATTGCAATGGTCACGGGATTGACATCCTGAAACTCGTAGCAGCCCAAGTTGGAAGCCAGTGGAAGGAC
ATCTATCAGTTCCTGTGCAATGCCAGTGAGAGAGAAGTGGCTGCTTTCTCCAATGGGTACACGGCGGACCATGAGCGGGC
CTACGCAGCTCTGCAGCACTGGACCATCCGGGGTCCTGAGGCCAGCCTTGCCCAACTAATTAGTGCCCTCCGCCAGCACC
GGCGCAATGATGTTGTGGAGAAGATTCGGGGGCTGATGGAAGATACGGCCCAGCTGGAAACGGACAAACTGGCTCTCCCG
ATGAGCCCCAGCCCCCTTAGCCCGAGCCCCATCCCCAGCCCCAACACGAAACTGGAGAATTCCGCTCTGCTGACCGTGGA
GCCTTCCCCGCTGGATAAGAACAAGGGCTTCTTCGTGGATGAGTCCGAGCCCCTGCTTCGCTGTGACTCCACATCCAGCG
GCTCGTCGGCGCTGAGCAGGACGGGCTCCTTTATTACCAAAGAAAAGAAGGACACAGTGTTGCGGCAGGTACGCCTGGAC
CCCTGTGACTTGCAGCCTATTTTTGATGACATGCTCCACATTCTGAATCCTGAGGAGCTGCGGGTGATTGAAGAGATTCC
TCAGGCTGAGGACAAGCTGGACCGGCTATTTGAGATTATTGGAGTCAAGAGCCAGGAAGCCAGTCAGACCCTCTTGGACT
CTGTATATAGCCATCTTCCCGACCTACTG
CTTGGATTCCTTAGCACCACCACAGCTCAGCTAGAACAGAAGGCCTCAAATCTCATTGGCAAATACCACCATGTTGACCG
TGCCACCGGCCAGGTGCTAACCTGTGACAAGTGTCCAGCAGGAACCTATGTGTCTGAGCACTGTACCAACACGAGCCTGC
GTGTCTGTAGCAGTTGCCCTGTGGGGACCTTTACCAGGCATGAGAATGGCATAGAGAAATGCCATGACTGTAGTCAGCCA
TGCCCATGGCCAATGGTTGAGAAATTACCTTGTGCTGCCTTGACTGACCGAGAATGTGCTTGCCCACCTGGCATGTTCCA
GTTTAATGGTACCTGCGCCCCCCATACGGTGTGTCCTGTGGGGTGGGGTGTGCGGAAGAAAGGGACGGAGACCGAGGACG
TGCGGTGTAAGCAGTGTGCTCGGGGTACCTTCTCTGATGTGCCTTCTAGTGTGATGAAATGCAAAGCATACACAGACTGT
CTGAGTCAGAACCTGGTGGTGATCAAGCCGGGGACCAAGGAAGCAGACAATGTCTGTGGCACACTTCCGCCCTTCTCCAG
CACGACCTCACCTACCCCTGGTACAACCATCTTTTCACACCCGGAGCACATGGAATCCCATGAAGTCCCTTCCTCCACTT
ATGTTCCCAAAGGCATGAACTCAACAGAATCCAACTCTTCTGCCTCTGTTAGACCAAAGGTACCGAGTGGCATCCAGGAA
GGGACAGTCCCTGACAACACAAGCTCGGCAAGGGGTGAGGAAGGCATGAACAAGACCCTCCCAAACCTCCAGGTAGTCAA
CCACCAGCAAGGCCCCCACCACAGACACATCCTGAAGCTGCTGCCGTCCATGGAGGCAACTGGGGGCGAGAAATCCAGCA
CACCCATCAAAGGCCTCAAGCGGACTCACCCCAGACAGAACTTGCACAAGCATTTTGACATCAATGAACATTTGCCCTGG
ATGATTGTGCTTTTTCTGCTGCTGGTGCTTGTGGTGATAGTGGTATGCAGTATCCGGAAAAGCTCAAGAACTCTGAAAAA
GGGGCCCCGGCAGGACCCTAGCACCATTGTGGAAAAGGCAGGGCTGAAGAAATCCGTGACCCCAACCCAGAACCGGGAGA
AGTGGATCTACTATTGCAATGGTCACGGGATTGACATCCTGAAACTCGTAGCAGCCCAAGTTGGAAGCCAGTGGAAGGAC
ATCTATCAGTTCCTGTGCAATGCCAGTGAGAGAGAAGTGGCTGCTTTCTCCAATGGGTACACGGCGGACCATGAGCGGGC
CTACGCAGCTCTGCAGCACTGGACCATCCGGGGTCCTGAGGCCAGCCTTGCCCAACTAATTAGTGCCCTCCGCCAGCACC
GGCGCAATGATGTTGTGGAGAAGATTCGGGGGCTGATGGAAGATACGGCCCAGCTGGAAACGGACAAACTGGCTCTCCCG
ATGAGCCCCAGCCCCCTTAGCCCGAGCCCCATCCCCAGCCCCAACACGAAACTGGAGAATTCCGCTCTGCTGACCGTGGA
GCCTTCCCCGCTGGATAAGAACAAGGGCTTCTTCGTGGATGAGTCCGAGCCCCTGCTTCGCTGTGACTCCACATCCAGCG
GCTCGTCGGCGCTGAGCAGGACGGGCTCCTTTATTACCAAAGAAAAGAAGGACACAGTGTTGCGGCAGGTACGCCTGGAC
CCCTGTGACTTGCAGCCTATTTTTGATGACATGCTCCACATTCTGAATCCTGAGGAGCTGCGGGTGATTGAAGAGATTCC
TCAGGCTGAGGACAAGCTGGACCGGCTATTTGAGATTATTGGAGTCAAGAGCCAGGAAGCCAGTCAGACCCTCTTGGACT
CTGTATATAGCCATCTTCCCGACCTACTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 54 .15 RPM |
| SRP017611_kidney | 35 .86 RPM |
| SRP017611_liver | 4 .35 RPM |
| SRP012049_cerebellum | 23 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011904 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_10 | 95.51 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000002078 retrocopies