Parental gene:

LSM4, ENSCAFG00000014900

Aliases:None
Description:Canis lupus familiaris LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) (LSM4), mRNA. [Source:RefSeq mRNA;Acc:NM_001110805]
Organism:Dog (Canis familiaris)
Coordinates:20:44707459..44720490(+)


>ENSCAFG00000014900
CGGCGGCGGCGGAAGTGGTCGGCGAGCCCGCTCCCCGCCGACACCATGCTTCCTTTGTCGCTGCTGAAGACGGCTCAGAA
TCATCCCATGTTGGTGGAACTCAAAAATGGGGAGACATACAATGGGCACCTGGTGAGCTGTGATAACTGGATGAACATTA
ACCTTCGAGAGGTGATCTGCACATCCAGGGATGGGGACAAGTTTTGGCGGATGCCCGAGTGCTACATCCGTGGCAGCACC
ATCAAGTACCTGCGTATCCCTGATGAGATCATCGACATGGTCAAGGAGGAGGTGGTGGCCAAGGGCCGTGGCCGCGGTGG
CCTGCAGCAGCAGAAGCAGCAGAAGGGCCGAGGCATGGGGGGTGCTGGGCGAGGTGTGTTTGGTGGCCGGGGCCGAGGTG
GGATCCCAGGCACAGGCAGAGGTCAGCCGGAAAAGAAGCCAGGCAGACAGGCGGGCAAA

Library Parental gene expression (RPM)
SRP017611_brain 6 .67 RPM
SRP017611_kidney 13 .87 RPM
SRP017611_liver 4 .28 RPM
SRP012049_cerebellum 10 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000007762 ortholog_one2many 2 retrogenes
retro_etel_1656, retro_etel_51,
Latimeria chalumnae ENSLACG00000015861 ortholog_one2one 1 retrogene
retro_lcha_28,
Myotis lucifugus ENSMLUG00000004010 ortholog_one2one 1 retrogene
retro_mluc_832,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1954 95.27 96.73
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Download FASTA sequences of all ENSCAFG00000014900 retrocopies