Parental gene: | PPIB, ENSCAFG00000017053 |
| Aliases: | None |
| Description: | peptidylprolyl isomerase B (cyclophilin B) [Source:HGNC Symbol;Acc:9255] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 30:28437471..28660068(-) |
>ENSCAFG00000017053
ATGCTGCGCCTCTCCGAGCGGAACATGAAGGTTCTCTTCGCCGCCGCCCTCGTCGTGGGCTCCGTCTTCTTCTTGCTGTT
GCCAGGCCCCTCCACGGCCGACGAGAAGAAGAAGGGGCCCAAAGTCACCGTCAAGGTGTACTTCGACCTTCGAATTGGAG
ATGAAGATATAGGCCGGGTGGTCATCGGTCTCTTTGGAAAGACTGTTCCAAAAACAGTGGATAATTTTGTGGCCTTAGCC
ACCGGGGAGAAAGGATTTGGCTACAAAGACAGCAAATTCCATCGTGTGATCAAGGACTTCATGATCCAGGGTGGAGACTT
TACCCGAGGAGATGGCACTGGAGGAAAGAGCATCTATGGTGAACGCTTCCCTGATGAGAACTTCAAGCTGAAACACTATG
GGCCTGGCTGGGTGAGCATGGCCAATGCAGGCAAAGACACCAACGGCTCCCAGTTCTTTATCACGACGGTTAAGACTGCC
TGGCTAGATGGCAAGCACGTGGTGTTCGGCAAAGTTTTGGAAGGCATGGAGGTAGTACGGAAGGTGGAGAGCACAAAAAC
AGACAGCCGGGACAAGCCCCTGAAGGATGTGACGATCGCAGACTGTGGCAAGATTGAGGTGGAGAAGCCCTTCGCCATCG
CCAAGGAGTAG
ATGCTGCGCCTCTCCGAGCGGAACATGAAGGTTCTCTTCGCCGCCGCCCTCGTCGTGGGCTCCGTCTTCTTCTTGCTGTT
GCCAGGCCCCTCCACGGCCGACGAGAAGAAGAAGGGGCCCAAAGTCACCGTCAAGGTGTACTTCGACCTTCGAATTGGAG
ATGAAGATATAGGCCGGGTGGTCATCGGTCTCTTTGGAAAGACTGTTCCAAAAACAGTGGATAATTTTGTGGCCTTAGCC
ACCGGGGAGAAAGGATTTGGCTACAAAGACAGCAAATTCCATCGTGTGATCAAGGACTTCATGATCCAGGGTGGAGACTT
TACCCGAGGAGATGGCACTGGAGGAAAGAGCATCTATGGTGAACGCTTCCCTGATGAGAACTTCAAGCTGAAACACTATG
GGCCTGGCTGGGTGAGCATGGCCAATGCAGGCAAAGACACCAACGGCTCCCAGTTCTTTATCACGACGGTTAAGACTGCC
TGGCTAGATGGCAAGCACGTGGTGTTCGGCAAAGTTTTGGAAGGCATGGAGGTAGTACGGAAGGTGGAGAGCACAAAAAC
AGACAGCCGGGACAAGCCCCTGAAGGATGTGACGATCGCAGACTGTGGCAAGATTGAGGTGGAGAAGCCCTTCGCCATCG
CCAAGGAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 71 .37 RPM |
| SRP017611_kidney | 183 .52 RPM |
| SRP017611_liver | 96 .37 RPM |
| SRP012049_cerebellum | 145 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000032245 | other_paralog | 1 retrogene | |
| Equus caballus | ENSECAG00000017164 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000012671 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000018698 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012012 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1999 | 87.42 | 72.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000017053 retrocopies