Parental gene: | VAMP4, ENSCHOG00000000124 |
| Aliases: | None |
| Description: | vesicle-associated membrane protein 4 [Source:HGNC Symbol;Acc:12645] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_2470:5296..24070(-) |
>ENSCHOG00000000124
ATGCCTCCCAAGTTCAAGCGCCACCTCAATGATGATGATGTCTCTGGTTCAGTGAAAAGTGAGAGGAGGAATCTTTTGGA
AGATGATTCGGATGAAGAAGAGGACTTTTTTGGACCTTCTGGACCTTTTGGACCTAGAAATGATAAAATTAAGCATGTTC
AGAATCAGGTGGATGAAGTTATTGATGTCATGCAAGAAAATATTACAAAGGTAATTGAAAGAGGGGAGAGACTAGATGAA
CTACAGGACAAATCAGAAAGCTTATCGGATAATGCAACTGCTTTTAGCAACAGATCCAAACAGCTTCGAAGGCAAATGTG
GTGGCGTGGATGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTATAGTTG
TGAAATACCATACTTAA
ATGCCTCCCAAGTTCAAGCGCCACCTCAATGATGATGATGTCTCTGGTTCAGTGAAAAGTGAGAGGAGGAATCTTTTGGA
AGATGATTCGGATGAAGAAGAGGACTTTTTTGGACCTTCTGGACCTTTTGGACCTAGAAATGATAAAATTAAGCATGTTC
AGAATCAGGTGGATGAAGTTATTGATGTCATGCAAGAAAATATTACAAAGGTAATTGAAAGAGGGGAGAGACTAGATGAA
CTACAGGACAAATCAGAAAGCTTATCGGATAATGCAACTGCTTTTAGCAACAGATCCAAACAGCTTCGAAGGCAAATGTG
GTGGCGTGGATGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTATAGTTG
TGAAATACCATACTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000011226 | ortholog_one2many | 13 retrogenes | |
| Monodelphis domestica | ENSMODG00000003811 | ortholog_many2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000026745 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000001709 | possible_ortholog | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017179 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000010829 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_58 | 69.77 | 62.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_513 | 63.30 | 78.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_2225 | 72.80 | 86.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2402 | 69.23 | 50.72 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000000124 retrocopies