Parental gene: | SNX1, ENSCHOG00000000707 |
| Aliases: | None |
| Description: | sorting nexin 1 [Source:HGNC Symbol;Acc:11172] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_5944:17828..56673(+) |
>ENSCHOG00000000707
ATGGCGTCGGGTGGTGGTGGCTGTAGCGCTTCGGAGAGACTCCCTCCGCCCTTCCCGGGCCTGGAGCTGGAGTCCGAGGG
GGCGGCCGAGGGGTCAGAACCTGAGGCTGGGGACAGCGACACCGAGGGGGAGGATATCTTTACCGGCGCCGCGGCGGCCA
GTAAGCCTCAGTCTCCTATGAGAACTGCTTCCCTTCTTCCCAAAGAAAATGGGGTCCATGAGGAACAAGACCAAGAGCCC
CAAGATCTCTTTGCAGATGCCACAGTGGAGCTATCCCTGGACAGCACACAAAATAATCAGAAGAAGGTGCCAGCCAAAAT
GCTTGTTTCTCTTCCTTCACAGGAAGCCACAAATTCTTCTAAGTCCCAGCCAAGCTATGAGGAGCTAGAGGAAGAAGAAC
AGGAGGACCAATTTGATTTGACAGTTGGTATAACTGATCCTGAGAAGATAGGAGATGGTATGAATGCCTATGTAGCCTAC
AAAGTGACAACACAGACGAGCTTACCAATATTCAGAAGTAAACAGTTTGCAGTGAAAAGAAGATTCAGTGATTTTCTGGG
TCTTTATGAGAAGCTTTCAGAGAAACACTCTCAGAATGGCTTCATTGTCCCTCCTCCACCTGAGAAAAGTCTAATAGGAA
TGACAAAAGTGAAAGTTGGGAAGGAAGATTCTTCTTCTGCAGAATTTCTTGAAAAACGGAGGGCTGCTCTAGAAAGGTAC
CTTCAGAGGATTGTGAATCATCCTACGATGTTACAGGACCCTGATGTCAGGGAGTTCTTGGAAAAAGAAGAGCTGCCACG
TGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCAGTTAGCAAAATGA
CCATCAAGATGAATGAATCAGACATATGGTTTGAGGAGAAGCTCCAGGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAA
CTGCATGCTGTTGTAGAAACTCTTGTCAACCATAGGAAAGAGCTAGCGCTTAACACAGCCCAGTTTGCAAAGAGTCTAGC
CATGCTCGGGAGCTCAGAGGACAACACGGCATTGTCACGGGCACTCTCCCAGCTCGCTGAGGTGGAAGAAAAAATTGAAC
AGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTTGCCGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATA
GTCCGAGCTGCCTTTGACCAACGCATGAAGACATGGCAGCGTTGGCAGGATGCTCAGGCAACACTGCAGAAGAAGCGGGA
GGCTGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGACAAGTTGCAACAAGCCAAGGATGAGATTGCAGAGTGGGAGTCTC
GAGTGACTTATGAAAGGGACTTTGAAAGAATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAATCC
AAGGACTTCAAAAACCACGTGATCAAGTACCTTGAGACACTTCTGTATTCACAGCAGCAGCTGGCAAAGTACTGGGAAGC
CTTCCTTCGTGAGGCAAAGGCCATCTCCTAA
ATGGCGTCGGGTGGTGGTGGCTGTAGCGCTTCGGAGAGACTCCCTCCGCCCTTCCCGGGCCTGGAGCTGGAGTCCGAGGG
GGCGGCCGAGGGGTCAGAACCTGAGGCTGGGGACAGCGACACCGAGGGGGAGGATATCTTTACCGGCGCCGCGGCGGCCA
GTAAGCCTCAGTCTCCTATGAGAACTGCTTCCCTTCTTCCCAAAGAAAATGGGGTCCATGAGGAACAAGACCAAGAGCCC
CAAGATCTCTTTGCAGATGCCACAGTGGAGCTATCCCTGGACAGCACACAAAATAATCAGAAGAAGGTGCCAGCCAAAAT
GCTTGTTTCTCTTCCTTCACAGGAAGCCACAAATTCTTCTAAGTCCCAGCCAAGCTATGAGGAGCTAGAGGAAGAAGAAC
AGGAGGACCAATTTGATTTGACAGTTGGTATAACTGATCCTGAGAAGATAGGAGATGGTATGAATGCCTATGTAGCCTAC
AAAGTGACAACACAGACGAGCTTACCAATATTCAGAAGTAAACAGTTTGCAGTGAAAAGAAGATTCAGTGATTTTCTGGG
TCTTTATGAGAAGCTTTCAGAGAAACACTCTCAGAATGGCTTCATTGTCCCTCCTCCACCTGAGAAAAGTCTAATAGGAA
TGACAAAAGTGAAAGTTGGGAAGGAAGATTCTTCTTCTGCAGAATTTCTTGAAAAACGGAGGGCTGCTCTAGAAAGGTAC
CTTCAGAGGATTGTGAATCATCCTACGATGTTACAGGACCCTGATGTCAGGGAGTTCTTGGAAAAAGAAGAGCTGCCACG
TGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCAGTTAGCAAAATGA
CCATCAAGATGAATGAATCAGACATATGGTTTGAGGAGAAGCTCCAGGAGGTAGAGTGTGAGGAGCAGCGCTTACGGAAA
CTGCATGCTGTTGTAGAAACTCTTGTCAACCATAGGAAAGAGCTAGCGCTTAACACAGCCCAGTTTGCAAAGAGTCTAGC
CATGCTCGGGAGCTCAGAGGACAACACGGCATTGTCACGGGCACTCTCCCAGCTCGCTGAGGTGGAAGAAAAAATTGAAC
AGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTTGCCGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATA
GTCCGAGCTGCCTTTGACCAACGCATGAAGACATGGCAGCGTTGGCAGGATGCTCAGGCAACACTGCAGAAGAAGCGGGA
GGCTGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGACAAGTTGCAACAAGCCAAGGATGAGATTGCAGAGTGGGAGTCTC
GAGTGACTTATGAAAGGGACTTTGAAAGAATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAATCC
AAGGACTTCAAAAACCACGTGATCAAGTACCTTGAGACACTTCTGTATTCACAGCAGCAGCTGGCAAAGTACTGGGAAGC
CTTCCTTCGTGAGGCAAAGGCCATCTCCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010128 | within_species_paralog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000017029 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_265 | 59.18 | 70.35 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_2390 | 86.33 | 53.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000000707 retrocopies