Parental gene: | DCP1A, ENSCPOG00000000073 |
| Aliases: | None |
| Description: | decapping mRNA 1A [Source:HGNC Symbol;Acc:18714] |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_0:55222916..55278538(+) |
>ENSCPOG00000000073
GCTTTCCGGTTCGAGACTCCGCCCCGCTGGAGGGGCTCAGCTTCGAGATTCAAGATGGAGTCGTTGAGTCGAGCGGGGCA
GGAGATGAGTCTGGCGGCTCTGAAGCAACACGACCCCTACATCACCAGCATCGCAGACCTCACGGGCCAGGTCGCTCTGT
ACACCTTCTGCCCCAAGGCCAACCAGTGGGAGAAGACAGATATAGAAGGGACCTTATTTGTATATCGACGGTCAGCCTCA
CCCTACCATGGTTTTACCATTGTAAATCGACTGAATATGCACAATCTAGTTGAACCAGTGAATAAAGATTTGGAATTTCA
ACTCCATGAACCATTTCTTCTGTATAGAAATGCAAGCTTATCAATATACAGTATCTGGTTTTATGACAAGAACGACTGTC
ACCGCATAGCAAAACTCATGGCAGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGAGATAAACAGAGT
CCCAGCCAGGCCAATGGCTGCAGTGACCATAGGCCTATTGACATCCTGGAAATGCTGAGTAGAGCCAAGGATGAGTACGA
GAGGGCTCAGATGGGCGACTCAAATATCTCCAGCCCTGGGTTACAGCCAAGCACTCAGCTTTTCAATCTAGGAAGCACTG
AAACTCTAGAAGAGACGTCCTCTGGATCACAAGATAAGTCTGCTCCATCTGGACATAAACATCTGACAGTGGAAGAATTG
TTTGGAACTTCTTTGCCAAAAGAACAACCAGCAGTTATGGGTCTGGATTCAGAAGAAGTAGAGAAGCTCGCAGGAGATGC
CACCCAGAAAGAGCCCAGCTCGTTCCTACCATTTCCCTTTGAGCATTCTGGAGAAGCCGCTCAGTTGGAAAACCTAAGTG
TCCATTCAGCTGCTCACCACACAGTCCAACCTGAAGTCTCTACTCCGGTGCTCATCACTCCAGCTTCAATCACACAGTCT
AGTGAAAGGCATGCTCCAAGCTACACGAGCCCATTGAGCCCCGTTCTCAGTCCCACTCTGCCACCTGAAGCTGCTACTAC
ACAGGTTGCCCCTGCATTACCTCGAAATAGCACTATGATGCCTGCAATGAAAACCACACCTAGGCAGAGGTCTCCACTGT
TGAACCAGCCAATCCAGGAGCTAAGCCACAGCAGTCTAATTGCCAGCCAGAGCCCCTTCAGGGCCCCACTGAGTATGACA
AACACAGCTGGCACACCCCTCCCAAGTGTTGATCTTCTGCAGAAACTCAGGTTGACTTCACAGCATGACCAAATACAGAC
ACAGCCACTTGGGAAAGGTGCTGTAGCACCCAGCTTTCCTCCAGCAGCTGGCCAGCTGGCCACACCCGAGAGCTTCATAG
AGCCTCCCCCGAAGACAGCAGCCGCCAGAACAGTGGCCTCTGCCTCCCTGAGCAACATGGTGCTTGCTCCCCTTCAGTCT
ATGCAGCAAAACCAGGACCCTGAAGTATTTGCCCAGCCTAAGATGCTATCCAGTGCCATCTCGGTTGCAGGCCCTCCATT
GGTTACTGCGACAACCACAGCAGTATCTTCAGTCCTGCTATCGCCAAGTGTTTTCCAGCAGACTGTTCCAAGGTCCGCCG
ACCTTGAGAGAAAAGCAAATTCTCCTTCTCCCCTCACCATTGGCACACCAGAAAATCAGAGAAAGTCTTCCCTTATTCTC
AGCAAGTCTCAGCTCCAGGATACATTGATACATCTGATTAAGAATGATTCCAGCTTCCTCAGTACACTTCATGAAGTTTA
CCTGCAGGTTCTGACCAAGAGCAAAGACAACTACAACCTATGA
GCTTTCCGGTTCGAGACTCCGCCCCGCTGGAGGGGCTCAGCTTCGAGATTCAAGATGGAGTCGTTGAGTCGAGCGGGGCA
GGAGATGAGTCTGGCGGCTCTGAAGCAACACGACCCCTACATCACCAGCATCGCAGACCTCACGGGCCAGGTCGCTCTGT
ACACCTTCTGCCCCAAGGCCAACCAGTGGGAGAAGACAGATATAGAAGGGACCTTATTTGTATATCGACGGTCAGCCTCA
CCCTACCATGGTTTTACCATTGTAAATCGACTGAATATGCACAATCTAGTTGAACCAGTGAATAAAGATTTGGAATTTCA
ACTCCATGAACCATTTCTTCTGTATAGAAATGCAAGCTTATCAATATACAGTATCTGGTTTTATGACAAGAACGACTGTC
ACCGCATAGCAAAACTCATGGCAGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGAGATAAACAGAGT
CCCAGCCAGGCCAATGGCTGCAGTGACCATAGGCCTATTGACATCCTGGAAATGCTGAGTAGAGCCAAGGATGAGTACGA
GAGGGCTCAGATGGGCGACTCAAATATCTCCAGCCCTGGGTTACAGCCAAGCACTCAGCTTTTCAATCTAGGAAGCACTG
AAACTCTAGAAGAGACGTCCTCTGGATCACAAGATAAGTCTGCTCCATCTGGACATAAACATCTGACAGTGGAAGAATTG
TTTGGAACTTCTTTGCCAAAAGAACAACCAGCAGTTATGGGTCTGGATTCAGAAGAAGTAGAGAAGCTCGCAGGAGATGC
CACCCAGAAAGAGCCCAGCTCGTTCCTACCATTTCCCTTTGAGCATTCTGGAGAAGCCGCTCAGTTGGAAAACCTAAGTG
TCCATTCAGCTGCTCACCACACAGTCCAACCTGAAGTCTCTACTCCGGTGCTCATCACTCCAGCTTCAATCACACAGTCT
AGTGAAAGGCATGCTCCAAGCTACACGAGCCCATTGAGCCCCGTTCTCAGTCCCACTCTGCCACCTGAAGCTGCTACTAC
ACAGGTTGCCCCTGCATTACCTCGAAATAGCACTATGATGCCTGCAATGAAAACCACACCTAGGCAGAGGTCTCCACTGT
TGAACCAGCCAATCCAGGAGCTAAGCCACAGCAGTCTAATTGCCAGCCAGAGCCCCTTCAGGGCCCCACTGAGTATGACA
AACACAGCTGGCACACCCCTCCCAAGTGTTGATCTTCTGCAGAAACTCAGGTTGACTTCACAGCATGACCAAATACAGAC
ACAGCCACTTGGGAAAGGTGCTGTAGCACCCAGCTTTCCTCCAGCAGCTGGCCAGCTGGCCACACCCGAGAGCTTCATAG
AGCCTCCCCCGAAGACAGCAGCCGCCAGAACAGTGGCCTCTGCCTCCCTGAGCAACATGGTGCTTGCTCCCCTTCAGTCT
ATGCAGCAAAACCAGGACCCTGAAGTATTTGCCCAGCCTAAGATGCTATCCAGTGCCATCTCGGTTGCAGGCCCTCCATT
GGTTACTGCGACAACCACAGCAGTATCTTCAGTCCTGCTATCGCCAAGTGTTTTCCAGCAGACTGTTCCAAGGTCCGCCG
ACCTTGAGAGAAAAGCAAATTCTCCTTCTCCCCTCACCATTGGCACACCAGAAAATCAGAGAAAGTCTTCCCTTATTCTC
AGCAAGTCTCAGCTCCAGGATACATTGATACATCTGATTAAGAATGATTCCAGCTTCCTCAGTACACTTCATGAAGTTTA
CCTGCAGGTTCTGACCAAGAGCAAAGACAACTACAACCTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .09 RPM |
| SRP017611_kidney | 2 .93 RPM |
| SRP017611_brain | 3 .91 RPM |
| SRP040447_lung | 7 .69 RPM |
| SRP040447_skeletal_muscle | 4 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006436 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_227 | 99.49 | 98.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000000073 retrocopies