Parental gene: | UCHL3, ENSCPOG00000012261 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_5:46021332..46073888(-) |
>ENSCPOG00000012261
ATGGAGGGTCAGCGCTGGTTGCCGCTGGAGGCCAACCCTGAGGTTACCAACCAGTTTCTCAAACAATTAGGTCTACATCC
TAACTGGCAGTTTGTTGATGTATATGGGATGGATCCTGAGCTCCTTAGCATGGTACCAAGACCAGTCTGTGCAGTGTTAC
TTCTTTTCCCTATTACAGAAAAGTATGAAGTATTCAGAACAGAAGAGGAGGAAAAAATAAAATCCCAGGGACAGGATGTT
ACATCATCAGTGTATTTCATGAAGCAAACCATCAGCAATGCCTGTGGAACAATTGGACTGATCCATGCTATTGCGAACAA
TAAAGACAAAATGCACTTTGTCTGGATCCAACCCTTGAAAAAATTCCTGGAGGAATCTGTGTCAATGAGCCCTGGAGAGC
GAGCCAGATACTTGGAGAACTATGACGCTATTCGAGTTACTCATGAGACCAGTGCCCATGAAGGTCAGACTGAGGCACCA
AATATAGATGAAAAAGTAGATCTTCATTTTATTGCATTAGTTCATGTAGATGGGCATCTCTACGAATTAGATGGGCGGAA
ACCGTTTCCAATTAACCATGGGAAAACTAGTGATGAGACTTTACTAGAGGATGCCATAGAAGTTTGCAAGAAGTTTATGG
AACGTGACCCTGATGAATTAAGATTCAATGCAATTGCTCTTTCTGCAGCATAG
ATGGAGGGTCAGCGCTGGTTGCCGCTGGAGGCCAACCCTGAGGTTACCAACCAGTTTCTCAAACAATTAGGTCTACATCC
TAACTGGCAGTTTGTTGATGTATATGGGATGGATCCTGAGCTCCTTAGCATGGTACCAAGACCAGTCTGTGCAGTGTTAC
TTCTTTTCCCTATTACAGAAAAGTATGAAGTATTCAGAACAGAAGAGGAGGAAAAAATAAAATCCCAGGGACAGGATGTT
ACATCATCAGTGTATTTCATGAAGCAAACCATCAGCAATGCCTGTGGAACAATTGGACTGATCCATGCTATTGCGAACAA
TAAAGACAAAATGCACTTTGTCTGGATCCAACCCTTGAAAAAATTCCTGGAGGAATCTGTGTCAATGAGCCCTGGAGAGC
GAGCCAGATACTTGGAGAACTATGACGCTATTCGAGTTACTCATGAGACCAGTGCCCATGAAGGTCAGACTGAGGCACCA
AATATAGATGAAAAAGTAGATCTTCATTTTATTGCATTAGTTCATGTAGATGGGCATCTCTACGAATTAGATGGGCGGAA
ACCGTTTCCAATTAACCATGGGAAAACTAGTGATGAGACTTTACTAGAGGATGCCATAGAAGTTTGCAAGAAGTTTATGG
AACGTGACCCTGATGAATTAAGATTCAATGCAATTGCTCTTTCTGCAGCATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 11 .27 RPM |
| SRP017611_kidney | 12 .04 RPM |
| SRP017611_brain | 12 .08 RPM |
| SRP040447_lung | 11 .17 RPM |
| SRP040447_skeletal_muscle | 8 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000024190 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003442 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000022111 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006789 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000017114 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009530 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1217 | 79.31 | 99.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000012261 retrocopies