Parental gene: | BCCIP, ENSDNOG00000002939 |
| Aliases: | None |
| Description: | BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:978] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6733:72407..120515(+) |
>ENSDNOG00000002939
GAAGTGAATATTGAATTTGAAGCTTACTCCATCTCAGATAACGATTATGATGGAATTAAGAAATTACTACACCAGCTCTT
CCTAAAGGCTCCTGTGAATACTGCAGAACTAACAAATCTCTTAGTACAGCAGAACCACATTGGGAGTGTGATTAAGCAAA
CAGATGTTTCAGAAGACAGCGATGACGATGTGGAAGTTGATGAAGATGAGATTTTTGGTTTCATAAGTCTTTTAAATTTA
ACTGAACGAAAGGGTACCCAGTGTGCTGAACAAATTAAAGAGTTGATTCTAAGCTTCTGTGAGAAGAACTGTGAGAAGAG
CATGGTTGAACAGCTGGACAAGCTTTTAAATGACACCACCAAGCCTGTGGGCTTGCTGCTAAGTGAAAGATTCATTAATG
TCCCTCCGCAGATCGCCCTGCCCATGCACCAGCAACTTCAGAAAGAACTGGCTGAAGCACACAAAATGAACAAGCCATGT
GGGAAGTGTTGCTTCTACCTTATGATTAGTAAGACATTTGTGGAAGCAGGAAAAAACAATTCCAAAAAGAAATGGAGCAA
CCAAAAGAAAGATGAGCTCATGTTTGCAAATGCAGAGGAAGAATTTTTCTATGAGTGGGCACTCAGAGGTCCAGATGCGA
CAGGATTAGAACTGATCCTAACACAGCATAGCAATGTTTTCAGGGCTGTGATAGTGAATGGTGAACTAATTCAATCAAGG
TCAATTCAAACTGGTTCCAAGGGAACCTGCCTAATGGTTGGACTCCTGTCACAG
GAAGTGAATATTGAATTTGAAGCTTACTCCATCTCAGATAACGATTATGATGGAATTAAGAAATTACTACACCAGCTCTT
CCTAAAGGCTCCTGTGAATACTGCAGAACTAACAAATCTCTTAGTACAGCAGAACCACATTGGGAGTGTGATTAAGCAAA
CAGATGTTTCAGAAGACAGCGATGACGATGTGGAAGTTGATGAAGATGAGATTTTTGGTTTCATAAGTCTTTTAAATTTA
ACTGAACGAAAGGGTACCCAGTGTGCTGAACAAATTAAAGAGTTGATTCTAAGCTTCTGTGAGAAGAACTGTGAGAAGAG
CATGGTTGAACAGCTGGACAAGCTTTTAAATGACACCACCAAGCCTGTGGGCTTGCTGCTAAGTGAAAGATTCATTAATG
TCCCTCCGCAGATCGCCCTGCCCATGCACCAGCAACTTCAGAAAGAACTGGCTGAAGCACACAAAATGAACAAGCCATGT
GGGAAGTGTTGCTTCTACCTTATGATTAGTAAGACATTTGTGGAAGCAGGAAAAAACAATTCCAAAAAGAAATGGAGCAA
CCAAAAGAAAGATGAGCTCATGTTTGCAAATGCAGAGGAAGAATTTTTCTATGAGTGGGCACTCAGAGGTCCAGATGCGA
CAGGATTAGAACTGATCCTAACACAGCATAGCAATGTTTTCAGGGCTGTGATAGTGAATGGTGAACTAATTCAATCAAGG
TCAATTCAAACTGGTTCCAAGGGAACCTGCCTAATGGTTGGACTCCTGTCACAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 35 .78 RPM |
| SRP012922_cerebellum | 23 .37 RPM |
| SRP012922_heart | 21 .11 RPM |
| SRP012922_kidney | 23 .27 RPM |
| SRP012922_liver | 17 .18 RPM |
| SRP012922_lung | 24 .74 RPM |
| SRP012922_quadricep_muscle | 24 .58 RPM |
| SRP012922_spleen | 34 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012873 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012411 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008541 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008761 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010901 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011828 | ortholog_one2one | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002570 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_530 | 78.36 | 66.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000002939 retrocopies