Parental gene: | RPL10A, ENSDNOG00000012921 |
| Aliases: | None |
| Description: | ribosomal protein L10a [Source:HGNC Symbol;Acc:10299] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_68103:4193..6509(+) |
>ENSDNOG00000012921
GCCACCATGAGCAGCAAAGTGTCGCGCGACACCCTCTACGAGGCGGTGCGGGAGGTCCTGCACGGGAACCAGCGCAAGCG
CCGGAAGTTTTTGGAAACGGTGGAGCTGCAGATCAGCTTGAAGAACTACGACCCGCAGAAGGACAAGCGTTTCTCGGGCA
CCGTCAGGCTGAAGTCCACTCCCCGCCCCAAGTTCTCTGTGTGCGTCCTGGGGGACCAGCAGCACTGCGATGAGGCCAAG
GCTGTGGACATCCCCCACATGGACATCGAGGCTCTGAAGAAGCTCAACAAGAACAAAAAGCTGGTGAAGAAGCTGGCCAA
GAAGTATGATGCCTTTTTGGCCTCAGAGTCCCTGATCAAGCAGATTCCCCGAATCCTGGGCCCAGGCCTGAATAAGGCTG
GCAAGTTCCCTTCCCTGCTGACCCACAACGAGAACATGGTGGCCAAAGTCGATGAAGTGAAGTCCACAATCAAGTTCCAG
ATGAAGAAGGTGCTGTGTCTAGCTGTGGCAGTTGGCCACGTGAAGATGACGGACGACGAGCTCGTGTACAACATTCACCT
AGCTGTGAACTTCCTGGTGTCACTGCTTAAGAAGAATTGGCAGAATGTCCGGGCCTTGTACATCAAGAGCACCATGGGCA
AGCCCCAGCGCTTGTACTAA
GCCACCATGAGCAGCAAAGTGTCGCGCGACACCCTCTACGAGGCGGTGCGGGAGGTCCTGCACGGGAACCAGCGCAAGCG
CCGGAAGTTTTTGGAAACGGTGGAGCTGCAGATCAGCTTGAAGAACTACGACCCGCAGAAGGACAAGCGTTTCTCGGGCA
CCGTCAGGCTGAAGTCCACTCCCCGCCCCAAGTTCTCTGTGTGCGTCCTGGGGGACCAGCAGCACTGCGATGAGGCCAAG
GCTGTGGACATCCCCCACATGGACATCGAGGCTCTGAAGAAGCTCAACAAGAACAAAAAGCTGGTGAAGAAGCTGGCCAA
GAAGTATGATGCCTTTTTGGCCTCAGAGTCCCTGATCAAGCAGATTCCCCGAATCCTGGGCCCAGGCCTGAATAAGGCTG
GCAAGTTCCCTTCCCTGCTGACCCACAACGAGAACATGGTGGCCAAAGTCGATGAAGTGAAGTCCACAATCAAGTTCCAG
ATGAAGAAGGTGCTGTGTCTAGCTGTGGCAGTTGGCCACGTGAAGATGACGGACGACGAGCTCGTGTACAACATTCACCT
AGCTGTGAACTTCCTGGTGTCACTGCTTAAGAAGAATTGGCAGAATGTCCGGGCCTTGTACATCAAGAGCACCATGGGCA
AGCCCCAGCGCTTGTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 508 .34 RPM |
| SRP012922_cerebellum | 227 .65 RPM |
| SRP012922_heart | 248 .97 RPM |
| SRP012922_kidney | 758 .14 RPM |
| SRP012922_liver | 261 .47 RPM |
| SRP012922_lung | 582 .03 RPM |
| SRP012922_quadricep_muscle | 318 .65 RPM |
| SRP012922_spleen | 713 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019494 | ortholog_one2one | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000005760 | ortholog_one2one | 6 retrogenes | |
| Monodelphis domestica | ENSMODG00000013766 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000037805 | ortholog_one2one | 8 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000014574 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000002047 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001543 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_157 | 83.87 | 83.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_469 | 73.42 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1917 | 67.12 | 99.54 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000012921 retrocopies