Parental gene: | ATG5, ENSDNOG00000013004 |
| Aliases: | None |
| Description: | autophagy related 5 [Source:HGNC Symbol;Acc:589] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_380:33026..221455(-) |
>ENSDNOG00000013004
CTGCTTTTGCCAAGAGTAAGTTATTTGACGCTGGTAACTGACAAAGTGAAAAAGCACTTTCAGAAGGTTATGAGACAAGA
AGACATTAGTGAAATATGGTTTGACTATGAAGGCACACCACTGAAATGGCATTATCCAATTGGTTTGCTATTTGACCTTA
TTGCATCAAGTTCTGCTCTTCCTTGGAACATCACAGTACATTTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAGCTCATTTTATGTCTTGTGTAAAAGAAGCTGATGCTTTAAAGCATAAAAGTCAAGTAATCAA
TGAAATGCAGAAAAAAGATCATAAGCAGCTCTGGATGGGATTACAAAATGACAGGTTTGACCAGTTTTGGGCTATCAATC
GGAAACTCATGGAATATCCTGCAGAAGAAAATGGATTTCGTTACATCCCTTTTAGAATATATCAGACAACAACTGAACGA
CCTTTCATTCAGAAGCTATTTCGTCCTGTGGCTGCAGATGGACAATTGCATACACTAGGAGATCTCCTCAAAGAAGTTTG
TCCTTCAGCAATTGCTCCTGAAGATGGGGAAAAAAAGAATCAAGTAATGATTCATGGAATTGAGCCAATGATGGAGACAC
CTCTGCAGTGGCTGAGTGAACATCTGAGCTACCCAGATAATTTTCTTCATGTTAGTATCATCCCACAACCATCAGATTGA
CTGCTTTTGCCAAGAGTAAGTTATTTGACGCTGGTAACTGACAAAGTGAAAAAGCACTTTCAGAAGGTTATGAGACAAGA
AGACATTAGTGAAATATGGTTTGACTATGAAGGCACACCACTGAAATGGCATTATCCAATTGGTTTGCTATTTGACCTTA
TTGCATCAAGTTCTGCTCTTCCTTGGAACATCACAGTACATTTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAGCTCATTTTATGTCTTGTGTAAAAGAAGCTGATGCTTTAAAGCATAAAAGTCAAGTAATCAA
TGAAATGCAGAAAAAAGATCATAAGCAGCTCTGGATGGGATTACAAAATGACAGGTTTGACCAGTTTTGGGCTATCAATC
GGAAACTCATGGAATATCCTGCAGAAGAAAATGGATTTCGTTACATCCCTTTTAGAATATATCAGACAACAACTGAACGA
CCTTTCATTCAGAAGCTATTTCGTCCTGTGGCTGCAGATGGACAATTGCATACACTAGGAGATCTCCTCAAAGAAGTTTG
TCCTTCAGCAATTGCTCCTGAAGATGGGGAAAAAAAGAATCAAGTAATGATTCATGGAATTGAGCCAATGATGGAGACAC
CTCTGCAGTGGCTGAGTGAACATCTGAGCTACCCAGATAATTTTCTTCATGTTAGTATCATCCCACAACCATCAGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 10 .11 RPM |
| SRP012922_cerebellum | 3 .30 RPM |
| SRP012922_heart | 2 .09 RPM |
| SRP012922_kidney | 6 .02 RPM |
| SRP012922_liver | 7 .74 RPM |
| SRP012922_lung | 8 .09 RPM |
| SRP012922_quadricep_muscle | 3 .63 RPM |
| SRP012922_spleen | 12 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006399 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000014090 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000016507 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_950 | 84.44 | 56.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1805 | 79.47 | 63.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000013004 retrocopies