Parental gene:

MTMR1, ENSDNOG00000013433

Aliases:None
Description:myotubularin related protein 1 [Source:HGNC Symbol;Acc:7449]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_415:43769..69682(+)


>ENSDNOG00000013433
CCCACAGGATCACATGTTGAATGGTGTAAACAGCTTATAGCTGCTACAATTTCTAGTCAGATTTCAGGTTCAGTGACATC
AGAAAATGTGTCCAGAGATTACAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCCACATTTTGTCCTTGATGTTCCCCTTGGAGTGATCAGCAG
AGTTGAGAAGATTGGAGCACAGAGCCATGGAGACAATTCCTGTGGTATAGAGATTGTGTGCAAGGATATGAGGAACTTGC
GACTTGCTTATAAACAGGAAGAACAGAGTAAATTGGGGATATTTGAAAACCTCAACAAACATGCATTTCCTCTTTCCAAT
GGGCAGACACTATTTGCGTTCAACTATAAAGAAAAATTTCCAATTAATGGCTGGAAAGTTTATGACCCAATAGCTGAATA
TAAGAGACAGGGCTTGCCAAATGAGAGTTGGAAAATATCCAAAATAAACAGTAATTATGAGCTCTGTGACACCTACCCTG
CCATCATTGTTGTGCCAACTAGTGTAAAAGATGATGACCTTTCAAAAGTGGCAGCGTTTAGAGCAAAAGGCAGAGTCCCT
GTGTTGTCATGGATTCATCCAGAAAGTCAGGCAACGATTACCCGTTGCAGCCAACCCCTTGTGGGTCCAAATGATAAACG
CTGCAAAGAAGATGAAAAATACTTGCAGACAATAATGGATGCCAATGCACAGTCACACAAACTTATCATCTTTGATGCTC
GACAAAACAGCGTTGCTGATACCAACAAGGCCAAGAGTGGAGGATATGAAAGTGAAAGTGCTTACCCAAATGCTGAACTG
GTGTTCTTGGAAATCCACAACATTCACGTGATGAGAGAGTCACTCCGTAAACTCAAAGAGATTGTCTACCCGTCAATCGA
CGAGACCCGGTGGTTCTCCAATGTGGATGGGACACACTGGCTAGAATATATAAGGATGCTTCTTGCTGGGGCAGTGAGAA
TAGCTGATAAAATAGAATCTGGGAAGACATCGGTGGTGGTACACTGCAGTGACGGTTGGGACCGAACAGCCCAGCTCACG
GCCCTGGCCATGCTGATGTTGGACAGTTACTACCGGACCATCAAAGGATTCGAAGCTCTCATAGAAAAGGAGTGGATAAG
CTTTGGACATAGGTTTGCACTACGAGTGGGCCATGGTAATGACAACCACGCCGATGCTGACAGATCTCCTATATTTCTCC
AGTTTATTGATTGTGTTTGGCAAATGACAAGACAGTTTCCTTCAGCATTCGAGTTTAATGAACTATTCTTGATTACCATT
TTGGATCACCTTTATAGCTGTCTCTTTGGGACCTTTTTGTGCAACTGTGAACAACAGCGATTCAAAGAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 14 .97 RPM
SRP012922_cerebellum 28 .59 RPM
SRP012922_heart 18 .33 RPM
SRP012922_kidney 10 .40 RPM
SRP012922_liver 12 .69 RPM
SRP012922_lung 12 .22 RPM
SRP012922_quadricep_muscle 39 .81 RPM
SRP012922_spleen 15 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000007323 ortholog_one2one 1 retrogene
retro_ecab_527,
Macropus eugenii ENSMEUG00000012257 ortholog_one2one 1 retrogene
retro_meug_1367,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_2271 60.06 63.02
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Download FASTA sequences of all ENSDNOG00000013433 retrocopies