Parental gene: | GPN3, ENSDNOG00000016646 |
| Aliases: | None |
| Description: | GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:30186] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1802:2..19387(-) |
>ENSDNOG00000016646
ATGCCTCGGTATGCGCAGCTGGTCATGAGCCCCGCAGGCAGCGGAAAGAGCACCTACTGTGCCACCATGGTCCAGCACTG
TGAAGCCCTCAATCGATCTGTCCAAGTTGTCAACCTCGATCCTGCAGCTGAACACTTCAACTACTCTGTGATGGCTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGTCAGATTGAGTTGTACACTCACCTGCCTGTGATGAAACAGCTGGTCCAGCAGCTGGAACAGTGGGAGTTCCGAG
TCTGTGGTGTTTTTCTTGTTGATTCTCAGTTTATGGTGGAGTCATTCAAGTTTCTCTCTGGCATCTTGGCGGCCCTGAGT
GCAATGATCTCTCTAGAAATTCCGCAAGTTAACATCATGACGAAGATGGATCTTCTGAGTAAGAAAGCTAAAAAAGAGAT
TGAAAAGTTTCTAGATCCCGATGTATATAGTTTGTTAGAAGACCCTACAAGTGGCTTAAGAAGCGCAAAGTTCAAAAAAT
TATCTAATGCTATATGTGGACTGATTGATGACTACAGCATGGTTCGATTTTTACCTTACGATCAGTCAGACGAAGAAAGC
ATGAACATTGTATTACAGCATATTGATTTCGCCATTCAGTATGGAGAAGATTTGGAATTTAAAGAACCGAAGGAACATGA
AGATGAATCATCTTCTATGTTT
ATGCCTCGGTATGCGCAGCTGGTCATGAGCCCCGCAGGCAGCGGAAAGAGCACCTACTGTGCCACCATGGTCCAGCACTG
TGAAGCCCTCAATCGATCTGTCCAAGTTGTCAACCTCGATCCTGCAGCTGAACACTTCAACTACTCTGTGATGGCTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGTCAGATTGAGTTGTACACTCACCTGCCTGTGATGAAACAGCTGGTCCAGCAGCTGGAACAGTGGGAGTTCCGAG
TCTGTGGTGTTTTTCTTGTTGATTCTCAGTTTATGGTGGAGTCATTCAAGTTTCTCTCTGGCATCTTGGCGGCCCTGAGT
GCAATGATCTCTCTAGAAATTCCGCAAGTTAACATCATGACGAAGATGGATCTTCTGAGTAAGAAAGCTAAAAAAGAGAT
TGAAAAGTTTCTAGATCCCGATGTATATAGTTTGTTAGAAGACCCTACAAGTGGCTTAAGAAGCGCAAAGTTCAAAAAAT
TATCTAATGCTATATGTGGACTGATTGATGACTACAGCATGGTTCGATTTTTACCTTACGATCAGTCAGACGAAGAAAGC
ATGAACATTGTATTACAGCATATTGATTTCGCCATTCAGTATGGAGAAGATTTGGAATTTAAAGAACCGAAGGAACATGA
AGATGAATCATCTTCTATGTTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 14 .00 RPM |
| SRP012922_cerebellum | 8 .11 RPM |
| SRP012922_heart | 5 .10 RPM |
| SRP012922_kidney | 6 .30 RPM |
| SRP012922_liver | 5 .57 RPM |
| SRP012922_lung | 9 .01 RPM |
| SRP012922_quadricep_muscle | 3 .81 RPM |
| SRP012922_spleen | 8 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009339 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000111231 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001697 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015510 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006494 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002831 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2095 | 87.35 | 59.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000016646 retrocopies