Parental gene:

ETF1, ENSECAG00000013041

Aliases:None
Description:eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:3477]
Organism:Horse (Equus caballus)
Coordinates:14:38003362..38011564(+)


>ENSECAG00000013041
AATGGCACAAGCATGATATCATTGATCATTCCTCCCAAAGACCAGATTTCAAGAGTGGCAAAAATGTTAGCAGATGAGTT
TGGAACTGCATCTAACATTAAATCACGTGTAAACCGCCTTTCAGTCTTGGGAGCCATTACATCTGTACAGCAAAGACTCA
AACTTTATAACAAAGTACCTCCAAATGGACTGGTTGTTTACTGTGGTACAATTGTAACAGAAGAAGGAAAGGAAAAGAAA
GTCAACATTGACTTTGAACCTTTCAAACCAATTAATACGTCGTTGTATTTGTGTGACAACAAATTCCATACAGAGGCTCT
TACAGCACTACTTTCAGATGATAGCAAGTTTGGCTTCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACACTCCAAG
GAAACACAAGAGAAGTCCTGCACAAATTCACTGTGGATCTCCCAAAGAAACATGGTAGAGGAGGTCAATCAGCCTTGCGT
TTTGCCCGTTTAAGAATGGAAAAGCGACATAACTATGTTCGGAAAGTAGCTGAGACTGCTGTACAGCTGTTTATTTCTGG
GGACAAAGTAAATGTGGCTGGTCTCGTTTTAGCTGGATCAGCTGACTTTAAAACTGAACTAAGTCAATCTGATATGTTTG
ATCAGAGGTTGCAATCAAAAGTTTTAAAATTAGTTGATATATCCTATGGTGGTGAAAATGGATTCAACCAAGCTATTGAG
TTATCTACTGAAGTCCTCTCCAACGTGAAATTCATTCAAGAGAAGAAATTAATAGGGCGATACTTTGATGAAATCAGCCA
GGACACGGGCAAGTACTGTTTTGGAGTTGAAGATACACTAAAGGCTTTAGAAATGGGAGCTGTAGAGATTCTCATAGTCT
ATGAAAATCTGGATATAATGAGATATGTTCTTCATTGCCAAGGCACAGAAGAGGAGAAAATTCTCTACCTGACTCCAGAA
CAAGAGAAGGATAAATCTCATTTCACAGACAAAGAGACAGGACAAGAACATGAGCTGATTGAGAGCATGCCCCTGTTGGA
ATGGTTTGCTAACAACTATAAAAAATTTGGAGCTACATTGGAAATTGTCACAGATAAGTCACAAGAAGGATCCCAGTTTG
TGAAAGGATTTGGTGGAATTGGAGGTATCTTGCGGTACCGAGTAGATTTCCAGGGAATGGAATACCAAGGAGGAGACGAT
GAATTTTTTGACCTTGATGACTACTAG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 12 .55 RPM
SRP021940_embryo 15 .16 RPM
SRP021940_cerebellum 10 .02 RPM
SRP021940_testis 16 .43 RPM
SRP021940_placental_villous 30 .36 RPM
SRP021940_articular_cartilage 12 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001282 ortholog_one2many 1 retrogene
retro_cfam_99,
Callithrix jacchus ENSCJAG00000006776 ortholog_one2one 2 retrogenes
retro_cjac_2316, retro_cjac_4133,
Dasypus novemcinctus ENSDNOG00000010830 ortholog_one2one 3 retrogenes
retro_dnov_1925, retro_dnov_2504, retro_dnov_610,
Echinops telfairi ENSETEG00000007362 ortholog_one2one 2 retrogenes
retro_etel_1237, retro_etel_1400,
Gorilla gorilla ENSGGOG00000000657 ortholog_one2one 4 retrogenes
retro_ggor_2326, retro_ggor_2561, retro_ggor_2562, retro_ggor_2919,
Macaca mulatta ENSMMUG00000005871 ortholog_one2many 2 retrogenes
retro_mmul_1658, retro_mmul_718,
Mustela putorius furo ENSMPUG00000009338 ortholog_one2one 1 retrogene
retro_mputfur_1448,
Oryctolagus cuniculus ENSOCUG00000006650 ortholog_one2many 3 retrogenes
retro_ocun_1188, retro_ocun_1614, retro_ocun_462,
Rattus norvegicus ENSRNOG00000019450 ortholog_one2one 1 retrogene
retro_rnor_2935,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_740 96.82 100.00
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Download FASTA sequences of all ENSECAG00000013041 retrocopies