Parental gene:

FGFR1OP2, ENSECAG00000016890

Aliases:None
Description:FGFR1 oncogene partner 2 [Source:HGNC Symbol;Acc:23098]
Organism:Horse (Equus caballus)
Coordinates:6:52373988..52393275(+)


>ENSECAG00000016890
TTAGAAATGAGTTGCACAATTGAGAAGGCGCTTGCTGATGCTAAAGCTCTCGTGGAAAGATTGCGAGATCACGACGATGC
TGCGGAATCTCTGATTGAGCAAACCACGGCTCTCAACAAGCGAGTAGAAGCCATGAAGCAGTATCAGGAAGAAATTCAAG
AACTTAATGAAGTTGCAAGACATCGGCCACGGTCCACATTAGTCATGGGAATCCAGCAAGAAAACAGACAAATCAGAGAA
TTGCAACAAGAAAATAAATTACGTACATCCCTGGAAGAACATCAGTCTGCCTTGGAACTTATAATGAGCAAGTATCGCGA
GCAAATGTTTAGATTGCTAATGGCTAGCAAAAAAGATGATCCGGGTATAATCCTGAAGTTAAAAGAGCAGCACTCCAAGG
AATTACAAGCACATGTTGACCAGATAACTGAAATGGCAGCAGTAATGAGGAAAGCCATTGAAATTGATGAGCAACACGGT
TGCAAGGAGCAGGAACGAATATTTCAACTTGAACAAGAAAACAAAGGCTTGAGAGAGATCCTTCAAATAACTCGAGAGTC
ATTTTTGAACCTTAGGAAAGATGATGTGTCAGAAAGCACATCTTTGTCAGCTTTAGTGACCAATAGTGACCTGAGCCTAC
GGAAGAGCTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 5 .66 RPM
SRP021940_embryo 7 .67 RPM
SRP021940_cerebellum 4 .05 RPM
SRP021940_testis 3 .77 RPM
SRP021940_placental_villous 4 .62 RPM
SRP021940_articular_cartilage 5 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000006966 ortholog_one2one 2 retrogenes
retro_dnov_2342, retro_dnov_2594,
Homo sapiens ENSG00000111790 ortholog_one2one 1 retrogene
retro_hsap_994,
Loxodonta africana ENSLAFG00000012476 ortholog_one2one 1 retrogene
retro_lafr_486,
Monodelphis domestica ENSMODG00000016618 ortholog_one2many 2 retrogenes
retro_mdom_1788, retro_mdom_244,
Mus musculus ENSMUSG00000040242 ortholog_one2one 2 retrogenes
retro_mmus_3669, retro_mmus_720,
Pongo abelii ENSPPYG00000004375 ortholog_one2one 1 retrogene
retro_pabe_839,
Pan troglodytes ENSPTRG00000004783 ortholog_one2one 1 retrogene
retro_ptro_756,
Tupaia belangeri ENSTBEG00000011581 ortholog_one2one 2 retrogenes
retro_tbel_3732, retro_tbel_4608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_988 58.04 50.93
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Download FASTA sequences of all ENSECAG00000016890 retrocopies