Parental gene: | TMEM106C, ENSECAG00000020351 |
| Aliases: | None |
| Description: | transmembrane protein 106C [Source:HGNC Symbol;Acc:28775] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 6:65620532..65624749(+) |
>ENSECAG00000020351
ATGGGGTCCCAGCATTCCGCCTCTGCTCGCCCCTCTTCCTGCAGGCGAAAGAAAGATGACAGGGAGGATTTTCTGGCTGA
ACGGGAGCAGGAAGAAGCCATCGCTCAGTTTCCGTATGTGGAGTTCACCGGTCGAGATAGCATCACCTGTCTCACGTGCC
AAGGGACCGGCTACATTCCAACAGAGCAAGTAAATGAATTGGTGGCTTTGATCCCACACAGTGATCAGAGGTTGCGCCCT
CAGAGAACTAAGCAATATGTACTCCTGTCTGTCTTGCTGTGTCTCCTGGCATCTGGGTTGGTGGTTTTCTTCCTCTTTCC
ACATTCAGTCCTTGTGGATGACGACGGCATCAAAGTGGTGAAAGTCACGTTTAATAAGCAGGACTCCCTGGTGATCCTCG
CCATCACGGCCACCCTGAAAATCAGGAACTCCAACTTCTACTCTGTGGCCGTGACCAGCCTGTCCACCCAGGTTCAGTAC
ATGAACACCGTGGTTGGGTCATATGTGACAGCAAATGTCTCCCTTATTCCACCTCGGAGCGAGCACCTGGTGAATTTTAC
TGTGAAGGCTGAGATGGGAGGACCGTATTCCTATGTGTACTTCTTCTGCACATTGCCGGATATCCTGATTCACAACATAG
TGATCTTCATGCGAACTTCAGTGAAGATTTCATACATTGGCCATGTGACCCAGAGCTCCTTGGAGACCCATCACTATGTG
GATTGTGGAGCAAATTCTACAGCTGTTTAG
ATGGGGTCCCAGCATTCCGCCTCTGCTCGCCCCTCTTCCTGCAGGCGAAAGAAAGATGACAGGGAGGATTTTCTGGCTGA
ACGGGAGCAGGAAGAAGCCATCGCTCAGTTTCCGTATGTGGAGTTCACCGGTCGAGATAGCATCACCTGTCTCACGTGCC
AAGGGACCGGCTACATTCCAACAGAGCAAGTAAATGAATTGGTGGCTTTGATCCCACACAGTGATCAGAGGTTGCGCCCT
CAGAGAACTAAGCAATATGTACTCCTGTCTGTCTTGCTGTGTCTCCTGGCATCTGGGTTGGTGGTTTTCTTCCTCTTTCC
ACATTCAGTCCTTGTGGATGACGACGGCATCAAAGTGGTGAAAGTCACGTTTAATAAGCAGGACTCCCTGGTGATCCTCG
CCATCACGGCCACCCTGAAAATCAGGAACTCCAACTTCTACTCTGTGGCCGTGACCAGCCTGTCCACCCAGGTTCAGTAC
ATGAACACCGTGGTTGGGTCATATGTGACAGCAAATGTCTCCCTTATTCCACCTCGGAGCGAGCACCTGGTGAATTTTAC
TGTGAAGGCTGAGATGGGAGGACCGTATTCCTATGTGTACTTCTTCTGCACATTGCCGGATATCCTGATTCACAACATAG
TGATCTTCATGCGAACTTCAGTGAAGATTTCATACATTGGCCATGTGACCCAGAGCTCCTTGGAGACCCATCACTATGTG
GATTGTGGAGCAAATTCTACAGCTGTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 18 .53 RPM |
| SRP021940_embryo | 32 .61 RPM |
| SRP021940_cerebellum | 0 .16 RPM |
| SRP021940_testis | 24 .62 RPM |
| SRP021940_placental_villous | 23 .77 RPM |
| SRP021940_articular_cartilage | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000008335 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000010370 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017734 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000014352 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000028397 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001184 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_660 | 69.92 | 93.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000020351 retrocopies