Parental gene: | PRKRIR, ENSECAG00000021982 |
| Aliases: | None |
| Description: | protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) [Source:HGNC Symbol;Acc:9440] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 7:67898195..67907524(+) |
>ENSECAG00000021982
AGATGCCAGAAGTGGGTGGAGAATTGTAGGAGAGCAGATTTAGAAGATAAAACACCTGATCAACTAAATAAACATTATCG
ATTATGTGCCAAACACTTTGAGACCTCTATGATCTGTCGAACTAGTCCTTATAGGACAGTTCTTCGAGATAATGCAATAC
CAACAATATTTGATCTTACCAGCCATTTGAACAATCCACATAGTAGACACAGAAAACGAATAAAAGAATTGAGTGAAGAT
GAAATCAGGACACTGAAACAGAAAAAAATTGATGAAACGTCTGAGCAGGAACAGAAACATAAAGAAATAAACAACAGCAG
TGCTCAGAAGCCCAGTGCAGAAGAGGGAGGTGAAGAACAGGATGAAGACATTTTACCTTTAACCCTTGAAGAGAAGGAAA
ACAAAGAATACTTAAAATCTTTATTTGAAATTTTGATTCTTATGGGAAAACAAAACATACCTCTGGATGGACATGAAGCT
GATGAAATCCCGGAAGGTCTCTTTACTCCTGATAACTTTCAAGCCCTGCTGGAGTGCCGGATAAATTCTGGTGAGGAGGT
TCTGAGAAAGCGCTTTGAGACAACAGCAGTTAACACGTTGTTCTGTTCGAAAACACAGCAGAAGCAGATGTTGGAGATCT
GTGAGAGCTGCATCCGGGAAGAGACCCTCAGGGAGGTGAGAGACTCTCGCTTCTTTTCCATCATCACTGACGATGTCGTG
GACATAGCAGGGGAAGAGCACCTGCCTGTGTTGGTGAGGTTTGTTGATGAATCTCATAACCTGAGAGAGGAATTCGTGGG
CTTCCTGCCTTATGAAGCTGATGCAGAAATTTTGGCTGTGAAATTTCACACTACAATAACTGAGAAGTGGGGATTAAACA
TGGAGTATTGCCGTGGTCAGGCTTACATTGTGTCCAGTGGATTTTCTTCCAAAATGAAAGTTGTTGCTTCTAGACTTTTA
GAGAAATATCCCCAAGCCATCTACACACTCTGCTCTTCCTGTGCCTTAAATATGTGGTTGGCAAAATCTGTGCCTGTTAT
GGGAGTGTCTGTTGCATTAGGAACAATTGAGGAAGTTTGTTCCTTTTTCCATCGATCACCACAACTGCTTTTAGAACTTG
ACAATGTAATCACTGTCCTCTTTCAGAACAATGAAGAACGGGGTAAAGAACTGAAGGAGATTTGCCATTCTCATTGGACA
GGCAGGCATGATGCTTTCGAGATTTTAGTGGACCTCCTCCAGGCGCTTGTTTTATGTTTAGATGGTATAAATAGTGACAC
AAGTATTAGATGGAATAACTGTATAGCTGGCCGAGCATTTGTCCTCTGTAGTGCAGTAACAGATTTTGATTTCATCGTTA
CCATTGTTGTTCTTAAAAATGTTCTATCTTTTACAAGAGCCTTTGGGAAAAATCTCCAGGGGCAAACCTCTGATGTCTTC
TTTGCAGCCAGTAGCTTGACTGCAGTGCTGCATTCACTAAATGAAGTGATGGAAAATATTGAAGTTTATCATGAATTTTG
GTTTGAGGAAGCCACAAATTTGGCAACCAAACTTGATATTCAAATGAAGCTCCCTGGGAAATTCCGCAGAGCACAGCAAG
GTAACCTGGAATCTCAGCTAACCTCTGAGGGTTACTATAAAGAAACTCTGAGTGTCCCAACAGTGGAACACATTATTCAG
GAACTGAAAGATATATTCTCAGAACAGCACCTCAAAGCTCTTAAATGCTTATCTCTGGTCCCGTCTGTCATGGGACAGCT
CAAGTTCAACACGTCAGAGGAGCATCATGCTGACATGTACAGAAGCGACTTACCCAATCCTGACACGCTCTCGGCCGAGC
TGCACTGTTGGAGAATCAAGTGGAAACACAGAGGGAAAGATATAGAGCTTCCATCCACCATTTATGAAGCCCTCCATCTG
CCAGACATCAAGTTTTTTCCTAATGTTTATGCACTGCTGAAGGTCCTTTGTATCCTTCCTGTGATGAAGGTTGAGAATGA
ACGCTATGAAAACGGGCGGAAGCGTCTCAAAGCATACCTGAGGAACACTTTGACAGACCAAAGGTCGAGTAACTTGGCTT
TGCTTAACATAAATTTTGATATAAAACATGATCTGGATTTAATGGTGGACACATATATCAAACTCTATACAGCTAAGTCA
GAGCTTCCTACAGAGAATTCAGAAACCATTGAGAATACCTAA
AGATGCCAGAAGTGGGTGGAGAATTGTAGGAGAGCAGATTTAGAAGATAAAACACCTGATCAACTAAATAAACATTATCG
ATTATGTGCCAAACACTTTGAGACCTCTATGATCTGTCGAACTAGTCCTTATAGGACAGTTCTTCGAGATAATGCAATAC
CAACAATATTTGATCTTACCAGCCATTTGAACAATCCACATAGTAGACACAGAAAACGAATAAAAGAATTGAGTGAAGAT
GAAATCAGGACACTGAAACAGAAAAAAATTGATGAAACGTCTGAGCAGGAACAGAAACATAAAGAAATAAACAACAGCAG
TGCTCAGAAGCCCAGTGCAGAAGAGGGAGGTGAAGAACAGGATGAAGACATTTTACCTTTAACCCTTGAAGAGAAGGAAA
ACAAAGAATACTTAAAATCTTTATTTGAAATTTTGATTCTTATGGGAAAACAAAACATACCTCTGGATGGACATGAAGCT
GATGAAATCCCGGAAGGTCTCTTTACTCCTGATAACTTTCAAGCCCTGCTGGAGTGCCGGATAAATTCTGGTGAGGAGGT
TCTGAGAAAGCGCTTTGAGACAACAGCAGTTAACACGTTGTTCTGTTCGAAAACACAGCAGAAGCAGATGTTGGAGATCT
GTGAGAGCTGCATCCGGGAAGAGACCCTCAGGGAGGTGAGAGACTCTCGCTTCTTTTCCATCATCACTGACGATGTCGTG
GACATAGCAGGGGAAGAGCACCTGCCTGTGTTGGTGAGGTTTGTTGATGAATCTCATAACCTGAGAGAGGAATTCGTGGG
CTTCCTGCCTTATGAAGCTGATGCAGAAATTTTGGCTGTGAAATTTCACACTACAATAACTGAGAAGTGGGGATTAAACA
TGGAGTATTGCCGTGGTCAGGCTTACATTGTGTCCAGTGGATTTTCTTCCAAAATGAAAGTTGTTGCTTCTAGACTTTTA
GAGAAATATCCCCAAGCCATCTACACACTCTGCTCTTCCTGTGCCTTAAATATGTGGTTGGCAAAATCTGTGCCTGTTAT
GGGAGTGTCTGTTGCATTAGGAACAATTGAGGAAGTTTGTTCCTTTTTCCATCGATCACCACAACTGCTTTTAGAACTTG
ACAATGTAATCACTGTCCTCTTTCAGAACAATGAAGAACGGGGTAAAGAACTGAAGGAGATTTGCCATTCTCATTGGACA
GGCAGGCATGATGCTTTCGAGATTTTAGTGGACCTCCTCCAGGCGCTTGTTTTATGTTTAGATGGTATAAATAGTGACAC
AAGTATTAGATGGAATAACTGTATAGCTGGCCGAGCATTTGTCCTCTGTAGTGCAGTAACAGATTTTGATTTCATCGTTA
CCATTGTTGTTCTTAAAAATGTTCTATCTTTTACAAGAGCCTTTGGGAAAAATCTCCAGGGGCAAACCTCTGATGTCTTC
TTTGCAGCCAGTAGCTTGACTGCAGTGCTGCATTCACTAAATGAAGTGATGGAAAATATTGAAGTTTATCATGAATTTTG
GTTTGAGGAAGCCACAAATTTGGCAACCAAACTTGATATTCAAATGAAGCTCCCTGGGAAATTCCGCAGAGCACAGCAAG
GTAACCTGGAATCTCAGCTAACCTCTGAGGGTTACTATAAAGAAACTCTGAGTGTCCCAACAGTGGAACACATTATTCAG
GAACTGAAAGATATATTCTCAGAACAGCACCTCAAAGCTCTTAAATGCTTATCTCTGGTCCCGTCTGTCATGGGACAGCT
CAAGTTCAACACGTCAGAGGAGCATCATGCTGACATGTACAGAAGCGACTTACCCAATCCTGACACGCTCTCGGCCGAGC
TGCACTGTTGGAGAATCAAGTGGAAACACAGAGGGAAAGATATAGAGCTTCCATCCACCATTTATGAAGCCCTCCATCTG
CCAGACATCAAGTTTTTTCCTAATGTTTATGCACTGCTGAAGGTCCTTTGTATCCTTCCTGTGATGAAGGTTGAGAATGA
ACGCTATGAAAACGGGCGGAAGCGTCTCAAAGCATACCTGAGGAACACTTTGACAGACCAAAGGTCGAGTAACTTGGCTT
TGCTTAACATAAATTTTGATATAAAACATGATCTGGATTTAATGGTGGACACATATATCAAACTCTATACAGCTAAGTCA
GAGCTTCCTACAGAGAATTCAGAAACCATTGAGAATACCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 3 .16 RPM |
| SRP021940_embryo | 6 .70 RPM |
| SRP021940_cerebellum | 1 .61 RPM |
| SRP021940_testis | 1 .34 RPM |
| SRP021940_placental_villous | 2 .41 RPM |
| SRP021940_articular_cartilage | 3 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000024488 | possible_ortholog | 1 retrogene | |
| Bos taurus | ENSBTAG00000031609 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000005274 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000137492 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000008784 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004091 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000013287 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_150 | 99.57 | 95.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000021982 retrocopies