Parental gene:

PPP4C, ENSECAG00000022179

Aliases:None
Description:protein phosphatase 4, catalytic subunit [Source:HGNC Symbol;Acc:9319]
Organism:Horse (Equus caballus)
Coordinates:13:19623673..19631021(+)


>ENSECAG00000022179
ATGGCGGAGATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCGGCGCTGCGAGCTCATCAAGGAGAGCGAAGTTAAGGC
CCTGTGCGCTAAGGCCAGAGAGATCTTGGTAGAGGAAAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTATGTGGTG
ACATCCATGGACAATTCTATGACCTCAAGGAGCTGTTCAGAGTGGGAGGTGATGTCCCTGAGACCAACTACCTCTTCATG
GGGGACTTTGTGGATCGTGGTTTCTATAGCGTCGAAACGTTCCTCCTGCTGCTGGCTCTTAAGGTTCGCTATCCTGACCG
CATCACCCTGATCCGGGGCAACCATGAGAGCCGTCAGATCACTCAGGTCTACGGCTTCTATGATGAGTGTCTACGCAAAT
ATGGCTCGGTGACGGTGTGGCGCTACTGCACTGAGATCTTTGACTACCTCAGCCTCTCGGCCATCATCGATGGCAAGATC
TTTTGCGTGCATGGGGGTCTCTCCCCGTCCATCCAGACCCTGGACCAGATCCGGACAATTGACCGAAAGCAAGAGGTGCC
TCATGACGGGCCCATGTGTGATCTGCTCTGGTCCGACCCTGAAGACACAACTGGCTGGGGTGTGAGCCCCCGGGGGGCTG
GCTACTTATTTGGCAGTGACGTGGTAGCCCAGTTCAATGCAGCCAACGACATTGACATGATCTGCCGTGCCCACCAACTG
GTGATGGAAGGTTACAAGTGGCACTTCAATGAGACTGTGCTCACGGTGTGGTCGGCACCCAACTATTGCTACCGCTGTGG
GAATGTGGCTGCCATCTTGGAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTCGAGGCTGCTCCCCAAGAGACAC
GGGGCATCCCCTCCAAGAAGCCCGTGGCCGACTACTTCCTCTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 72 .39 RPM
SRP021940_embryo 98 .69 RPM
SRP021940_cerebellum 46 .17 RPM
SRP021940_testis 199 .82 RPM
SRP021940_placental_villous 80 .49 RPM
SRP021940_articular_cartilage 19 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015223 ortholog_one2one 1 retrogene
retro_amel_286,
Canis familiaris ENSCAFG00000017089 ortholog_one2one 1 retrogene
retro_cfam_16,
Ciona savignyi ENSCSAVG00000004266 ortholog_one2one 1 retrogene
retro_csav_27,
Felis catus ENSFCAG00000014171 ortholog_one2one 1 retrogene
retro_fcat_1043,
Macropus eugenii ENSMEUG00000000397 ortholog_one2one 5 retrogenes
retro_meug_1014, retro_meug_1188, retro_meug_1336, retro_meug_560, retro_meug_859,
Ornithorhynchus anatinus ENSOANG00000008136 ortholog_one2one 1 retrogene
retro_oana_25,
Pan troglodytes ENSPTRG00000007984 ortholog_one2one 1 retrogene
retro_ptro_28,
Tursiops truncatus ENSTTRG00000005532 ortholog_one2one 1 retrogene
retro_ttru_1015,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_911 68.05 76.55
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Download FASTA sequences of all ENSECAG00000022179 retrocopies