Parental gene: | FTSJ1, ENSEEUG00000001469 |
| Aliases: | None |
| Description: | FtsJ RNA methyltransferase homolog 1 (E. coli) [Source:HGNC Symbol;Acc:13254] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_626:46261..61266(+) |
>ENSEEUG00000001469
ATGGGTCGGACATCGAAAGACAAGCGGGACGTGTACTACCGCCTGGCCAAGGAGAACGGCTGGCGTGCCCGCAGCGCCTT
CAAACTGCTACAGCTCGATGAGGAGTTCCAGCTCTTCCAAGGGGTGAAGCGAGCAGTTGACCTGTGTGCAGCCCCAGGCA
GCTGGAGCCAGGTGCTGAGCCAGAAGATCGGGAACCAGGGCTCTGGCCATGTGGTGGCCGTGGACCTCCAGGCCATGGCT
CCTCTGCCAGGTGTCATACAGATCCAGGGGGACATCACCCAGCTGTCTACTGCCAAGGAGATTATCCGGCACTTCGAGGG
CAGTTCTGCGGACCTAGTGGTGTGCGACGGGGCTCCTGATGTCACTGGCCTCCACGACGTGGATGAGTACATGCAAGCCC
AGCTCCTCCTAGCTGCTCTGAATATCGCCACACATGTCTTGAAGCCAGGAGGCAGCTTTGTAGCCAAGATCTTCCGAGGT
CGGGATGTGACACTGCTTTATAGCCAGCTGCGTGTCTTCTTCTCCAACGTGGTCTGTGCCAAGCCCCGAAGCAGCCGCAA
CTCAAGCATTGAGGCCTTCGCGGTCTGTCGTGGCTATGATCCTCCTGTGGGCTTCCTCCCGGACCTGTCCAAACCCCTGC
TGGACCATTCCTATGATCCTGATTTCAACCAGTTGGAAGGCCCCACCCGCATCATTGTGCCCTTCGTGACCTGTGGGGAC
CTGAGCGCCTATGATTCCGACCGCAGCTACCCTCTAGACTTAGAGGACGGCTCGGAGTACAAGTACACTCCACCCACGCA
GCCACCCATCTCACCACCGTACCAGGAGGCCTGCACATTGAAGAGGAGGGGGCGGCTGGCCAAGGAGATCCGCCCCCAG
ATGGGTCGGACATCGAAAGACAAGCGGGACGTGTACTACCGCCTGGCCAAGGAGAACGGCTGGCGTGCCCGCAGCGCCTT
CAAACTGCTACAGCTCGATGAGGAGTTCCAGCTCTTCCAAGGGGTGAAGCGAGCAGTTGACCTGTGTGCAGCCCCAGGCA
GCTGGAGCCAGGTGCTGAGCCAGAAGATCGGGAACCAGGGCTCTGGCCATGTGGTGGCCGTGGACCTCCAGGCCATGGCT
CCTCTGCCAGGTGTCATACAGATCCAGGGGGACATCACCCAGCTGTCTACTGCCAAGGAGATTATCCGGCACTTCGAGGG
CAGTTCTGCGGACCTAGTGGTGTGCGACGGGGCTCCTGATGTCACTGGCCTCCACGACGTGGATGAGTACATGCAAGCCC
AGCTCCTCCTAGCTGCTCTGAATATCGCCACACATGTCTTGAAGCCAGGAGGCAGCTTTGTAGCCAAGATCTTCCGAGGT
CGGGATGTGACACTGCTTTATAGCCAGCTGCGTGTCTTCTTCTCCAACGTGGTCTGTGCCAAGCCCCGAAGCAGCCGCAA
CTCAAGCATTGAGGCCTTCGCGGTCTGTCGTGGCTATGATCCTCCTGTGGGCTTCCTCCCGGACCTGTCCAAACCCCTGC
TGGACCATTCCTATGATCCTGATTTCAACCAGTTGGAAGGCCCCACCCGCATCATTGTGCCCTTCGTGACCTGTGGGGAC
CTGAGCGCCTATGATTCCGACCGCAGCTACCCTCTAGACTTAGAGGACGGCTCGGAGTACAAGTACACTCCACCCACGCA
GCCACCCATCTCACCACCGTACCAGGAGGCCTGCACATTGAAGAGGAGGGGGCGGCTGGCCAAGGAGATCCGCCCCCAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .70 RPM |
| SRP017611_kidney | 4 .13 RPM |
| SRP017611_brain | 48 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000031829 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000015339 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000014092 | ortholog_one2many | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000003977 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008009 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016174 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000007091 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_222 | 75.49 | 68.94 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000001469 retrocopies