Parental gene: | THAP1, ENSEEUG00000003332 |
| Aliases: | None |
| Description: | THAP domain containing, apoptosis associated protein 1 [Source:HGNC Symbol;Acc:20856] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_3587:405..5699(-) |
>ENSEEUG00000003332
ATGGTGCAGTCCTGTTCCGCCTACGGCTGCAAGAACCGATACGATAAGGATAAGCCCGTTTCTTTTCACAAGTTTCCTCT
TACACGACCTAATCTTTGTAAAGAATGGGAAGCAGCTGTTAGAAGAAAAAACTTTAAGCCAACAAAGTACAGCAGTATTT
GTTCAGAACACTTTACTCCAGACTGCTTTAAGAGGGAATGCAACAACAAGTTACTGAAGGAGAATGCTGTGCCCACAATA
TTTCTCTGTACTGAACCGCATGACAAGAAGGAAGAGCTGCTGGAACCACAGGGACAGCTTCACCCGCCTCCTTTAGCACC
TCCCATTTCCCAAGTTGATGCTGCGATTGGATTACTCATGCCTCCTCTTCAGACCCCTGATAACCTCTCAGTTTTCTGTG
ACCACAACTATACCGTGGAGGATACCATGCACCAGAGAAAAAGAATTCATCAGCTAGAACAACAAGTTGAAAAACTGAGA
AAGAAGCTCAAGACTGCGCAGCAGCGATGCAGAAGACAGGAGCGACAGCTTGAGAAGTTAAAGGAGGTTGTACACTTCCA
GAAAGAGAAAGAAGACACACCAGAGAGAGGTTATGTGATTCTACCAAATGACTACTTTGAAATAGTTGAAGTACCGGCTT
AA
ATGGTGCAGTCCTGTTCCGCCTACGGCTGCAAGAACCGATACGATAAGGATAAGCCCGTTTCTTTTCACAAGTTTCCTCT
TACACGACCTAATCTTTGTAAAGAATGGGAAGCAGCTGTTAGAAGAAAAAACTTTAAGCCAACAAAGTACAGCAGTATTT
GTTCAGAACACTTTACTCCAGACTGCTTTAAGAGGGAATGCAACAACAAGTTACTGAAGGAGAATGCTGTGCCCACAATA
TTTCTCTGTACTGAACCGCATGACAAGAAGGAAGAGCTGCTGGAACCACAGGGACAGCTTCACCCGCCTCCTTTAGCACC
TCCCATTTCCCAAGTTGATGCTGCGATTGGATTACTCATGCCTCCTCTTCAGACCCCTGATAACCTCTCAGTTTTCTGTG
ACCACAACTATACCGTGGAGGATACCATGCACCAGAGAAAAAGAATTCATCAGCTAGAACAACAAGTTGAAAAACTGAGA
AAGAAGCTCAAGACTGCGCAGCAGCGATGCAGAAGACAGGAGCGACAGCTTGAGAAGTTAAAGGAGGTTGTACACTTCCA
GAAAGAGAAAGAAGACACACCAGAGAGAGGTTATGTGATTCTACCAAATGACTACTTTGAAATAGTTGAAGTACCGGCTT
AA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .25 RPM |
| SRP017611_kidney | 4 .88 RPM |
| SRP017611_brain | 2 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000003837 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001391 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_131 | 86.92 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_172 | 75.56 | 61.03 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000003332 retrocopies