Parental gene: | RCC1, ENSEEUG00000004565 |
| Aliases: | None |
| Description: | regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:1913] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_7576:39593..47311(+) |
>ENSEEUG00000004565
TCACATAGGTCCCACAACACAGAGCCAGGCTTGGTGCTGACACTGGGCCAGGGCGACGTGGGCCAGCTGGGGTTGGGCGA
GAATGTGATGGAGAGGAAGAAGCCAGCCCTGGTGCCCATTCCGGAAGATATTGTGCAGGTTGAGGCTGGGGGCATGCACA
CAGTGTGTCTAAGCAAAAGTGGCCAGGTCTACTCCTTTGGCTGCAATGATGAAGGTGCCCTTGGAAGAGATACATCAATG
GAAGGCTCAGAGATGGTCTCAGGGAAAGTAGAACTACAAGAGAAGGACAATAATGGTGTGATTGGACTCTTGGAGCCCAT
GAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGAGTATGCCTGTGGTAAAGGTGGCCTCAGGAAATGACCACTTGGTGA
TGCTGACAACCGATGGTGACCTCTACACTCTGGGCTGTGGGGAGCAGGGCCAGCTGGGCCGTGTGCCTGAATTATTTGCA
AACCGTGGGGGCCGTCAGGGCCTCGAACGACTCCTGGTTCCCAAATGTGTGATGCTGAAATCCAGGGGAAGTCGGGGTCA
TGTGAAATTCCAGGATGCCTTTTGTGGTGCCTACTTCACCTTTGCTATCTCCTGTGAGGGTCATGTATATGGTTTCGGTC
TTTCCAACTACCATCAGCTTGGAACTTCAGGCACAGAATCTTGCTTCATACCCCAGAATCTGACATCCTTCAAGAACTCC
ACCAAGTCATGGGTGGGCTTCTCTGGTGGCCAGCACCATACAGTCTGCATGGATTCGGAAGGAAAAGCGTACAGCCTGGG
CCGTGCTGAGTATGGGCGGCTGGGCCTTGGGGAGGGTGCTGAAGAGAAGAGCATACCTACTCTCATCTCCAGGCTTCCTG
CTGTCTCCTCAGTGGCTTGTGGAGCCTCTGTGGGATATGCTGTGACCAAAGATGGTCGTGTTTTTGCCTGGGGCATGGGC
ACCAACTACCAGCTAGGCACAGGACAGGAAGAGGATGCATGGAGCCCCGTGGAGATGACTGGTAAACAGCTGGAGAACCG
AGTAGTCTTATCTGTGTCCAGTGGTGGCCAGCACACAGTCTTACTGGTCAAGGACAAGCAACAGAGCTGA
TCACATAGGTCCCACAACACAGAGCCAGGCTTGGTGCTGACACTGGGCCAGGGCGACGTGGGCCAGCTGGGGTTGGGCGA
GAATGTGATGGAGAGGAAGAAGCCAGCCCTGGTGCCCATTCCGGAAGATATTGTGCAGGTTGAGGCTGGGGGCATGCACA
CAGTGTGTCTAAGCAAAAGTGGCCAGGTCTACTCCTTTGGCTGCAATGATGAAGGTGCCCTTGGAAGAGATACATCAATG
GAAGGCTCAGAGATGGTCTCAGGGAAAGTAGAACTACAAGAGAAGGACAATAATGGTGTGATTGGACTCTTGGAGCCCAT
GAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGAGTATGCCTGTGGTAAAGGTGGCCTCAGGAAATGACCACTTGGTGA
TGCTGACAACCGATGGTGACCTCTACACTCTGGGCTGTGGGGAGCAGGGCCAGCTGGGCCGTGTGCCTGAATTATTTGCA
AACCGTGGGGGCCGTCAGGGCCTCGAACGACTCCTGGTTCCCAAATGTGTGATGCTGAAATCCAGGGGAAGTCGGGGTCA
TGTGAAATTCCAGGATGCCTTTTGTGGTGCCTACTTCACCTTTGCTATCTCCTGTGAGGGTCATGTATATGGTTTCGGTC
TTTCCAACTACCATCAGCTTGGAACTTCAGGCACAGAATCTTGCTTCATACCCCAGAATCTGACATCCTTCAAGAACTCC
ACCAAGTCATGGGTGGGCTTCTCTGGTGGCCAGCACCATACAGTCTGCATGGATTCGGAAGGAAAAGCGTACAGCCTGGG
CCGTGCTGAGTATGGGCGGCTGGGCCTTGGGGAGGGTGCTGAAGAGAAGAGCATACCTACTCTCATCTCCAGGCTTCCTG
CTGTCTCCTCAGTGGCTTGTGGAGCCTCTGTGGGATATGCTGTGACCAAAGATGGTCGTGTTTTTGCCTGGGGCATGGGC
ACCAACTACCAGCTAGGCACAGGACAGGAAGAGGATGCATGGAGCCCCGTGGAGATGACTGGTAAACAGCTGGAGAACCG
AGTAGTCTTATCTGTGTCCAGTGGTGGCCAGCACACAGTCTTACTGGTCAAGGACAAGCAACAGAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 12 .70 RPM |
| SRP017611_kidney | 22 .69 RPM |
| SRP017611_brain | 8 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009686 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000017075 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000050106 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_418 | 88.09 | 74.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000004565 retrocopies