Parental gene:

PABPN1L, ENSEEUG00000004747

Aliases:None
Description:poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:HGNC Symbol;Acc:37237]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:scaffold_207734:1544..4145(+)


>ENSEEUG00000004747
ATGTGGCCCTTCCTCAGTCATGCTCTCTTCCCACCCCCCTCTGAGGCCTGGCTCCAGAGTGCCTCTTGGGACCCAGAGGC
CCAGGGCTGGGGGGCCTGGAGTGGGACTGAGAAGTGCTCTCTGGGGCTCGGGGGTGGGGACAAGGAAGAAGACATCAGAG
ATGCAGACTTCCTGCTTTCACTCTTGGAGAGGAAGAATCTGGCCCAGTGCCCCACACCTACAGAGGAGCTGGAAGCCATC
AAGAGGAAGCTTTGGGCCATGGAGGCCCAGGGATGCCTTGAGACCCCTCTACAGAAGGTGGAGGCTGACCACGGATCTGT
CTATGTGGGCAGCGTGGACTATGGGGGCTCAGCTGAGGAGCTAGAGGCCCACTTCAACCATTGTGGGAACATCCACCGGG
TCACCATCCTGTGTGACAAGTTCTCTGGACACCCCAAGGGATATGCCTACATAGAGTTTGCCAGTGAAAGCTCCGTGCAG
GCTGCTGTGGGGCTGGACAGCAGTGTGTTCCGAGGCCGCATCATCAAGGTCCTGCCCAAAAGGACTAACTTCCCAGGGAT
TAGCTCCACAGACCGCGGGGGCCCCAGGAGCCACCTAGGCACCAGGGGTGGACCCTACCTTCGCAATGGCCTCCAAGCAG
GGGCCCACTTCAGATTTCAGGGACGGAACCGGGGCCGAGGAAAACTCTCACTGTGGTACTCACCCTATTGA

Library Parental gene expression (RPM)
SRP017611_liver 0 .16 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_brain 0 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000023752 ortholog_one2one 1 retrogene
retro_btau_972,
Ochotona princeps ENSOPRG00000005597 ortholog_one2one 2 retrogenes
retro_opri_1001, retro_opri_174,
Tursiops truncatus ENSTTRG00000004691 ortholog_one2one 3 retrogenes
retro_ttru_1488, retro_ttru_243, retro_ttru_822,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_633 60.74 55.51
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Download FASTA sequences of all ENSEEUG00000004747 retrocopies