Parental gene: | TTLL1, ENSEEUG00000004854 |
| Aliases: | None |
| Description: | tubulin tyrosine ligase-like family, member 1 [Source:HGNC Symbol;Acc:1312] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_1338:9086..62974(-) |
>ENSEEUG00000004854
ATGGCAGGAAAAGTGAAGTGGGTCACCGACATTGAGAAGTCAGTGCTGATAAATAACTTTGAAAAGCGAGGATGGATCCA
AGTGACAGAAAACGAGGACTGGAATTTCTACTGGATGAGCGTGCAGACCATCCGAAACGTTTTCAGCGTGGAGACTGGGT
ATCGCCTCTCAGATGACCAGATCGTCAACCATTTCCCGAACCACTATGAGCTGACCCGCAAGGATCTGATGGTGAAGAAT
ATTAAGCGGTACAGGAAAGAGCTGGAAAAGGAAGGAAGCCCACTCGCAGAAAAAGACGAAAATGGAAAATACCTCTATCT
GGACTTTGTTCCAATCACCTACATGCTGCCCGCTGACTACAACCTGTTTGTGGAGGAGTTCCGGAAGAGCCCCTCTAGCA
CGTGGATCATGAAGCCGTGCGGCAAAGCCCAGGGCAAAGGCATCTTTCTCATCAACAAGCTCTCACAAATCAAGAAGTGG
TCCCGGGACAGCAAAACCTCCTCGTTTGTGACTCAGTCAACGAAGGAAGCCTATGTGATCTCTCTGTACATCAACAATCC
GCTGCTCATTGGTGGGAGGAAGTTCGACCTGCGCTTGTATGTCCTCGTGTCTACCTACCGCCCCCTGCGCTGCTACATGT
ATAAACTTGGATTTTGTCGCTTCTGCACAGTCAAATACACGCCAAGTACCAGTGAGCTGGATAACATGTTTGTGCACCTC
ACCAATGTTGCCATTCAGAAACACGGGGAGGACTACAACCATATCCACGGGGGCAAGTGGACCGTCAGCAACCTGCGGCT
CTACCTGGAGAGCACCCGGGGCAGGGAGGTGACCACCAAGCTGTTCGACGAGATCCACTGGATCATCGTGCAGTCACTGA
AGGCCGTGGCCCCGGTGATGAACAATGACAAGCACTGCTTTGAGTGCTATGGCTACGACATCATCATCGACGACAAACTG
AAGCCCTGGCTGATTGAGGTGAATGCCTCACCGTCGCTCACCTCCAGCACTGCCAACGATCGAATCCTGAAGTACAACCT
CATCAACGACACCCTCAACATTGCGGTTCCCAACGGCGAGATTCCAGACTGCAAGTGGAACAAGTCCCCCCCTAAGGAGG
TGCTCGGCAACTATGAGATTCTGTACAGCGAAGAGCTGGCACAGGGGGACAAGGCTGACGAGCTCAGAGGGTGCCCAGGC
CAGGCTCTAGGGCCCAGAGGGGTTCGCTCAAGAGACGTGGGGAGAAATGTCCTCACAACCTGGAAGTGA
ATGGCAGGAAAAGTGAAGTGGGTCACCGACATTGAGAAGTCAGTGCTGATAAATAACTTTGAAAAGCGAGGATGGATCCA
AGTGACAGAAAACGAGGACTGGAATTTCTACTGGATGAGCGTGCAGACCATCCGAAACGTTTTCAGCGTGGAGACTGGGT
ATCGCCTCTCAGATGACCAGATCGTCAACCATTTCCCGAACCACTATGAGCTGACCCGCAAGGATCTGATGGTGAAGAAT
ATTAAGCGGTACAGGAAAGAGCTGGAAAAGGAAGGAAGCCCACTCGCAGAAAAAGACGAAAATGGAAAATACCTCTATCT
GGACTTTGTTCCAATCACCTACATGCTGCCCGCTGACTACAACCTGTTTGTGGAGGAGTTCCGGAAGAGCCCCTCTAGCA
CGTGGATCATGAAGCCGTGCGGCAAAGCCCAGGGCAAAGGCATCTTTCTCATCAACAAGCTCTCACAAATCAAGAAGTGG
TCCCGGGACAGCAAAACCTCCTCGTTTGTGACTCAGTCAACGAAGGAAGCCTATGTGATCTCTCTGTACATCAACAATCC
GCTGCTCATTGGTGGGAGGAAGTTCGACCTGCGCTTGTATGTCCTCGTGTCTACCTACCGCCCCCTGCGCTGCTACATGT
ATAAACTTGGATTTTGTCGCTTCTGCACAGTCAAATACACGCCAAGTACCAGTGAGCTGGATAACATGTTTGTGCACCTC
ACCAATGTTGCCATTCAGAAACACGGGGAGGACTACAACCATATCCACGGGGGCAAGTGGACCGTCAGCAACCTGCGGCT
CTACCTGGAGAGCACCCGGGGCAGGGAGGTGACCACCAAGCTGTTCGACGAGATCCACTGGATCATCGTGCAGTCACTGA
AGGCCGTGGCCCCGGTGATGAACAATGACAAGCACTGCTTTGAGTGCTATGGCTACGACATCATCATCGACGACAAACTG
AAGCCCTGGCTGATTGAGGTGAATGCCTCACCGTCGCTCACCTCCAGCACTGCCAACGATCGAATCCTGAAGTACAACCT
CATCAACGACACCCTCAACATTGCGGTTCCCAACGGCGAGATTCCAGACTGCAAGTGGAACAAGTCCCCCCCTAAGGAGG
TGCTCGGCAACTATGAGATTCTGTACAGCGAAGAGCTGGCACAGGGGGACAAGGCTGACGAGCTCAGAGGGTGCCCAGGC
CAGGCTCTAGGGCCCAGAGGGGTTCGCTCAAGAGACGTGGGGAGAAATGTCCTCACAACCTGGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .41 RPM |
| SRP017611_kidney | 12 .94 RPM |
| SRP017611_brain | 24 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryctolagus cuniculus | ENSOCUG00000016224 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0030823 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_145 | 76.95 | 66.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000004854 retrocopies