Parental gene: | UBA3, ENSEEUG00000005430 |
| Aliases: | None |
| Description: | ubiquitin-like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:12470] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_4757:6042..31224(-) |
>ENSEEUG00000005430
GAGAAGAAAAGAAGGAGAATAGAGGAGCTGCTGGCTGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTCTCTCCAGTTTTTGTTAGATACTTGTAAAGTTCTAGTCATTGGAGCAGGCGGCTTAGGATGTGAGCTTCTCAAAAAT
CTGGCATTATCTGGTTTTAGACAGATTCATGTTATAGATATGGACACTATAGATGTTTCCAATTTAAATAGGCAGTTTTT
ATTTAGGCCCAAAGATGTTGGAAGACCTAAAGCAGAAGTTGCTGCAGAATTTCTAAATGATAGAATTCCTAATTGCAACG
TAGTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCCATATAATTGTATGTGGGCTGGAC
TCTATCATAGCCAGAAGGTGGATAAATGGCATGTTGATATCTCTTCTAAATTACGAAGATGGTGTATTAGATCCAAGCTC
CATAGTCCCTTTGATAGACGGGGGGACAGAAGGTTTTAAAGGAAATGCCCGAGTGATTCTGCCTGGAATGACTGCTTGCA
TTGAATGCACACTGGAACTGTATCCGCCACAGGTTAATTTTCCCATGTGTACCATTGCATCTATGCCCAGACTACCAGAA
CACTGTATTGAGTATGTAAGGATACTGCAGTGGCCTAAGGAGCAGCCTTTTGGAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTCCAAAATCACTAGAACGAGCATCACAATATATTAGAGGTGTTACATATAGACTCA
CTCAGGGTGTAGTAAAACGAATCATACCTGCAGTAGCTTCCACAAATGCTGTCATTGCAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTGCATATATTCCCCTTAATAACTACTTGGTATTTAATGATGTAGATGGACTCTACACATACAC
ATTTGAAGCAGAGAGAAAGGACAACTGCCCAGCCTGTAGCCAGCTTCCTCAAAATATTCAGTTTTCTTCATCAGCTAAAC
TGCAGGAAGTTTTAGATTACCTAACCAATAGTGCTTCTCTGCAGATGAAATCTCCAGCCATCACAGCCACATTAGAGGGG
AAGAATAGGACACTTTACTTACAGTCGGTAACTTCTATTGAAGAAAGAACAAGACCAAATCTCTCCAAGANNNNNNNNNA
ATTGGGCCTTGTCGACGGGCAAGAATTGGCAGTTGCTGATGTCACCACACCACAGACTGTACTATTCAAACTTCATTTTA
CTTCTTAA
GAGAAGAAAAGAAGGAGAATAGAGGAGCTGCTGGCTGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTCTCTCCAGTTTTTGTTAGATACTTGTAAAGTTCTAGTCATTGGAGCAGGCGGCTTAGGATGTGAGCTTCTCAAAAAT
CTGGCATTATCTGGTTTTAGACAGATTCATGTTATAGATATGGACACTATAGATGTTTCCAATTTAAATAGGCAGTTTTT
ATTTAGGCCCAAAGATGTTGGAAGACCTAAAGCAGAAGTTGCTGCAGAATTTCTAAATGATAGAATTCCTAATTGCAACG
TAGTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCCATATAATTGTATGTGGGCTGGAC
TCTATCATAGCCAGAAGGTGGATAAATGGCATGTTGATATCTCTTCTAAATTACGAAGATGGTGTATTAGATCCAAGCTC
CATAGTCCCTTTGATAGACGGGGGGACAGAAGGTTTTAAAGGAAATGCCCGAGTGATTCTGCCTGGAATGACTGCTTGCA
TTGAATGCACACTGGAACTGTATCCGCCACAGGTTAATTTTCCCATGTGTACCATTGCATCTATGCCCAGACTACCAGAA
CACTGTATTGAGTATGTAAGGATACTGCAGTGGCCTAAGGAGCAGCCTTTTGGAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTCCAAAATCACTAGAACGAGCATCACAATATATTAGAGGTGTTACATATAGACTCA
CTCAGGGTGTAGTAAAACGAATCATACCTGCAGTAGCTTCCACAAATGCTGTCATTGCAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTGCATATATTCCCCTTAATAACTACTTGGTATTTAATGATGTAGATGGACTCTACACATACAC
ATTTGAAGCAGAGAGAAAGGACAACTGCCCAGCCTGTAGCCAGCTTCCTCAAAATATTCAGTTTTCTTCATCAGCTAAAC
TGCAGGAAGTTTTAGATTACCTAACCAATAGTGCTTCTCTGCAGATGAAATCTCCAGCCATCACAGCCACATTAGAGGGG
AAGAATAGGACACTTTACTTACAGTCGGTAACTTCTATTGAAGAAAGAACAAGACCAAATCTCTCCAAGANNNNNNNNNA
ATTGGGCCTTGTCGACGGGCAAGAATTGGCAGTTGCTGATGTCACCACACCACAGACTGTACTATTCAAACTTCATTTTA
CTTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .91 RPM |
| SRP017611_kidney | 19 .69 RPM |
| SRP017611_brain | 28 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010117 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013626 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013395 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007771 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006221 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000011506 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_374 | 78.20 | 63.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_663 | 83.62 | 88.13 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000005430 retrocopies