Parental gene: | POLR3D, ENSEEUG00000007632 |
| Aliases: | None |
| Description: | polymerase (RNA) III (DNA directed) polypeptide D, 44kDa [Source:HGNC Symbol;Acc:1080] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | scaffold_377742:36647..41228(-) |
>ENSEEUG00000007632
ATGTCGGAAGGAAATGCAGCGGGCGAGCCCAACACACCCGGAGTCCCCCGACCCCTCCTCACCGGAGCCCGGGGACTTAT
CGGGCGGCGGCCGGCGCCCCCCCTCACCCCGGGCCGCCTTCCTTCCATCCGCTCCAGGGATCTCACCCTCGGAGGCGTCA
AGAAGAAAACCTTCACTCCAAATATCATCAGTCGGAAGATCAAGGAAGAACCCAAGGAAGATGTAACCATCAAGAAGGAA
AAGCGGGAGAGAGATAGAGATCGGCAGAGAGATGGCCATGGTCGGGGTAGAGGTCGCCCAGAGCTGATCCAATCCCATTC
CATCTTTGAGCAAGGCCCTGCGGAAATGATGAGGAAAACAGGGAACTGGGATAAGACAGTGGATATGTTGGACGTGGGAC
CCTCTCATATCATCAACATCAAAAAAGAAAAGAGGGAGACAGATGAAGAGACCAAACAGATCCTGCGCATGCTAGAGAAG
GATGACTTCATCGATGATCCTGGACTGAGAAACGACACTCGGAACATGCCTGTGCAGCTGCCACTGGCTCACTCAGGGTG
GCTTTTCAAGGAAGAAAGCGAGGAGGCAGATGAGAAGCCTTCGCTGAGCAACCCCAAGGAAGAGGACATGGATGTGGACA
TTCCTCCTGTGAAAGTGAAAGAGGAGCCACGTGATGATGATGAGGAGACTAAAGTGAAGGCTCCTCCCAGAGTAGCCAAG
AAGACCCCTGGCCTCCCTAAGGATGTGTCTGTGTCTGAGTTGCTCAGAGAGCTGAGCCTCACCCAGGAAGAGGAGTTGTT
GTTCCTCCAGCTGCCTGACACACTTCCTGGCCAGCCACCTACTCAGGACATCAAGCCTGTCAAGACAGAGGTGCAGAATG
AGGATGGACAGATGGTGGTGATAAAACAAGAAAAAGATCGGGAAGCCAGGCTAGCAGAGAATGTTTGTGCCCTGGCTGAC
TTGACAGAGGGTCAGGTTGGCAAGCTGCTCATCCGAAAGTCAGGAAAGGTGCAGCTCCTCCTGGGCAAGGTGACTCTGGA
TGTGACAATGGGAACCACCTGCTCTTTCCTGCAGGAGCTGGTATCCGTGGGTCTTGGAGAAAATAGGACCGGCGAGATGA
CAGTGTTGGGACACGTGAAGCACAAACTTGTATGTTCCCCAGATTTCGAGTCCCTATTGGATCACAAACACCGATAA
ATGTCGGAAGGAAATGCAGCGGGCGAGCCCAACACACCCGGAGTCCCCCGACCCCTCCTCACCGGAGCCCGGGGACTTAT
CGGGCGGCGGCCGGCGCCCCCCCTCACCCCGGGCCGCCTTCCTTCCATCCGCTCCAGGGATCTCACCCTCGGAGGCGTCA
AGAAGAAAACCTTCACTCCAAATATCATCAGTCGGAAGATCAAGGAAGAACCCAAGGAAGATGTAACCATCAAGAAGGAA
AAGCGGGAGAGAGATAGAGATCGGCAGAGAGATGGCCATGGTCGGGGTAGAGGTCGCCCAGAGCTGATCCAATCCCATTC
CATCTTTGAGCAAGGCCCTGCGGAAATGATGAGGAAAACAGGGAACTGGGATAAGACAGTGGATATGTTGGACGTGGGAC
CCTCTCATATCATCAACATCAAAAAAGAAAAGAGGGAGACAGATGAAGAGACCAAACAGATCCTGCGCATGCTAGAGAAG
GATGACTTCATCGATGATCCTGGACTGAGAAACGACACTCGGAACATGCCTGTGCAGCTGCCACTGGCTCACTCAGGGTG
GCTTTTCAAGGAAGAAAGCGAGGAGGCAGATGAGAAGCCTTCGCTGAGCAACCCCAAGGAAGAGGACATGGATGTGGACA
TTCCTCCTGTGAAAGTGAAAGAGGAGCCACGTGATGATGATGAGGAGACTAAAGTGAAGGCTCCTCCCAGAGTAGCCAAG
AAGACCCCTGGCCTCCCTAAGGATGTGTCTGTGTCTGAGTTGCTCAGAGAGCTGAGCCTCACCCAGGAAGAGGAGTTGTT
GTTCCTCCAGCTGCCTGACACACTTCCTGGCCAGCCACCTACTCAGGACATCAAGCCTGTCAAGACAGAGGTGCAGAATG
AGGATGGACAGATGGTGGTGATAAAACAAGAAAAAGATCGGGAAGCCAGGCTAGCAGAGAATGTTTGTGCCCTGGCTGAC
TTGACAGAGGGTCAGGTTGGCAAGCTGCTCATCCGAAAGTCAGGAAAGGTGCAGCTCCTCCTGGGCAAGGTGACTCTGGA
TGTGACAATGGGAACCACCTGCTCTTTCCTGCAGGAGCTGGTATCCGTGGGTCTTGGAGAAAATAGGACCGGCGAGATGA
CAGTGTTGGGACACGTGAAGCACAAACTTGTATGTTCCCCAGATTTCGAGTCCCTATTGGATCACAAACACCGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .20 RPM |
| SRP017611_kidney | 13 .13 RPM |
| SRP017611_brain | 23 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000013488 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000025090 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000168495 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000000465 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002109 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000023226 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009491 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015502 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018419 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000020056 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012745 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_277 | 85.22 | 57.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_705 | 79.49 | 57.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000007632 retrocopies