Parental gene: | C11orf1, ENSEEUG00000009977 |
| Aliases: | None |
| Description: | chromosome 11 open reading frame 1 [Source:HGNC Symbol;Acc:1163] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_6873:361652..366546(+) |
>ENSEEUG00000009977
ATGACTGCCTCCATTTGTCCCTGCTACTCAGGATTGCTTTGCCATAGACAGTCTCTTGCCTGCTATCTTGTAAACCCTCA
CTATGGCAGCCTCATTAATGCAGATGGTCATGCTGAAGTGTGGACAGACTGGAATAATATGTCCAAGTTTTTTCAGTATG
GATGGAGATGCAACACTAATGAGAATGCCTATTCAGACCGCACCCTCGTGGGCAATTGGAACCAGGAGAGATATGATCTA
AAGAATATTGTGCAGCCCAATCCCTTGCCTTCCCAGTTTGGACACTACTTTGAAACAACATATGATGCAAGCTACAACAG
CAAACTGCCAGTTCCAACTCAGAGATTTAAGCGGGAACCTCACTGGTTCCCAGGACATCAACCTGAACTTGATTCTCCTC
AATACAAGTGCACAGGAAAGTCAACGTATATGAGTAACTATTCAAAACCTCAA
ATGACTGCCTCCATTTGTCCCTGCTACTCAGGATTGCTTTGCCATAGACAGTCTCTTGCCTGCTATCTTGTAAACCCTCA
CTATGGCAGCCTCATTAATGCAGATGGTCATGCTGAAGTGTGGACAGACTGGAATAATATGTCCAAGTTTTTTCAGTATG
GATGGAGATGCAACACTAATGAGAATGCCTATTCAGACCGCACCCTCGTGGGCAATTGGAACCAGGAGAGATATGATCTA
AAGAATATTGTGCAGCCCAATCCCTTGCCTTCCCAGTTTGGACACTACTTTGAAACAACATATGATGCAAGCTACAACAG
CAAACTGCCAGTTCCAACTCAGAGATTTAAGCGGGAACCTCACTGGTTCCCAGGACATCAACCTGAACTTGATTCTCCTC
AATACAAGTGCACAGGAAAGTCAACGTATATGAGTAACTATTCAAAACCTCAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 4 .98 RPM |
| SRP017611_kidney | 8 .06 RPM |
| SRP017611_brain | 6 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000003039 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000021163 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000037971 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_658 | 87.06 | 55.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000009977 retrocopies