Parental gene:

RHOQ, ENSEEUG00000015226

Aliases:None
Description:ras homolog family member Q [Source:HGNC Symbol;Acc:17736]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_2853:4030..44246(+)


>ENSEEUG00000015226
AGCGTCACCGTAGGGGGCAAGCAGTACCTCCTGGGACTCTATGACACAGCCGGACAGGAAGACTATGATCGTCTGAGGCC
TTTATCGTATCCAATGACTGATGTCTTCCTTATATGCTTCTCGGTGGTAAATCCTGCCTCATTTCAAAATGTGAAAGAGG
AGTGGGTGCCAGAACTGAAGGAATATGCACCCAATGTCCCCTTCTTGTTAATAGGAACTCAGATTGATCTCCGAGATGAC
CCCAAAACTTTAGCAAGACTGAATGATATGAAAGAAAAGCCTATATGTTTGGAACAAGGACAGAAACTAGCAAAAGAGAT
AGGAGCGTGCTGCTATGTGGAATGTTCAGCTTTAACCCAGAAGGGATTGAAGACTGTTTTTGATGAGGCTATCATAGCCA
TTTTAACTCCAAAGAAACATACAGTTAAAAAAAGAATAGGATCACGATGTATAAACTGTTGTCTGATTACGTGA

Library Parental gene expression (RPM)
SRP017611_liver 4 .50 RPM
SRP017611_kidney 6 .19 RPM
SRP017611_brain 16 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006082 ortholog_one2one 1 retrogene
retro_amel_383,
Choloepus hoffmanni ENSCHOG00000000549 ortholog_one2one 3 retrogenes
retro_chof_2030, retro_chof_457, retro_chof_914,
Callithrix jacchus ENSCJAG00000000685 ortholog_one2one 1 retrogene
retro_cjac_2403,
Erinaceus europaeus ENSEEUG00000009509 other_paralog 1 retrogene
retro_eeur_20,
Echinops telfairi ENSETEG00000019234 ortholog_one2one 3 retrogenes
retro_etel_1468, retro_etel_596, retro_etel_672,
Felis catus ENSFCAG00000015608 ortholog_one2one 1 retrogene
retro_fcat_795,
Homo sapiens ENSG00000119729 ortholog_one2one 3 retrogenes
retro_hsap_1333, retro_hsap_2158, retro_hsap_2316,
Loxodonta africana ENSLAFG00000004327 ortholog_one2one 1 retrogene
retro_lafr_316,
Microcebus murinus ENSMICG00000009124 ortholog_one2one 1 retrogene
retro_mmur_29,
Myotis lucifugus ENSMLUG00000001567 ortholog_one2one 1 retrogene
retro_mluc_595,
Otolemur garnettii ENSOGAG00000033272 ortholog_one2one 1 retrogene
retro_ogar_742,
Pongo abelii ENSPPYG00000012439 ortholog_one2one 2 retrogenes
retro_pabe_1107, retro_pabe_2195,
Pteropus vampyrus ENSPVAG00000013691 ortholog_one2one 1 retrogene
retro_pvam_611,
Rattus norvegicus ENSRNOG00000015415 ortholog_one2one 1 retrogene
retro_rnor_473,
Sus scrofa ENSSSCG00000008439 ortholog_one2one 1 retrogene
retro_sscr_102,
Tarsius syrichta ENSTSYG00000002837 ortholog_one2one 1 retrogene
retro_tsyr_1609,
Tursiops truncatus ENSTTRG00000011892 ortholog_one2one 1 retrogene
retro_ttru_805,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_129 73.02 78.98
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Download FASTA sequences of all ENSEEUG00000015226 retrocopies