Parental gene:

ENSEEUG00000015895

Aliases:None
Description:None
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_7147:343..3122(+)


>ENSEEUG00000015895
ATGTCGCACAAACAGATTTATTATTCAGACAAATATGACGACGAGGAGTTCGAGTACCGGCATGTCATGTTGCCCAAGGA
CATAGCCAAGCTGGTCCCTAAAACCCATTTGATGTCCGAGTCTGAATGGAGGAATCTTGGTGTTCAGCAGAGTCAGGGAT
GGGTCCATTATATGATCCACGAGCCAGAGCCTCACATCTTGCTGTTCCGGCGGCCACTGCCAAAGAAGCCCAAGACATGA

Library Parental gene expression (RPM)
SRP017611_liver 0 .80 RPM
SRP017611_kidney 0 .94 RPM
SRP017611_brain 0 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000033635 possible_ortholog 10 retrogenes
retro_cjac_13, retro_cjac_1441, retro_cjac_1478, retro_cjac_1779, retro_cjac_2040, retro_cjac_2212, retro_cjac_2649, retro_cjac_276, retro_cjac_57, retro_cjac_876,
Dipodomys ordii ENSDORG00000003764 possible_ortholog 6 retrogenes
retro_dord_25, retro_dord_290, retro_dord_599, retro_dord_64, retro_dord_647, retro_dord_739,
Erinaceus europaeus ENSEEUG00000004384 within_species_paralog 7 retrogenes
retro_eeur_183, retro_eeur_255, retro_eeur_293, retro_eeur_551, retro_eeur_632, retro_eeur_639, retro_eeur_640,
Homo sapiens ENSG00000173207 possible_ortholog 1 retrogene
retro_hsap_27,
Gorilla gorilla ENSGGOG00000013419 possible_ortholog 4 retrogenes
retro_ggor_10, retro_ggor_1070, retro_ggor_2739, retro_ggor_659,
Rattus norvegicus ENSRNOG00000042561 possible_ortholog 1 retrogene
retro_rnor_97,
Sarcophilus harrisii ENSSHAG00000004796 ortholog_one2one 1 retrogene
retro_shar_786,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_302 77.78 100.00
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Download FASTA sequences of all ENSEEUG00000015895 retrocopies