Parental gene: | MRTO4, ENSETEG00000001675 |
| Aliases: | None |
| Description: | mRNA turnover 4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:18477] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_3240:50938..55887(+) |
>ENSETEG00000001675
ATGCCCAAGTCCAAGCGGGACAAGAAAGTCTCCTTAACCAAAACTGCCAAGAAAGGCTTGGAACTGAAACAGAACCTAAT
AGAAGAGCTTCGGAAATGTGTGGACACATACAAGTACCTCTTCATCTTCTCCGTGGCCAACATGAGGAACAGCAAGCTGA
AGGACATCCGGAACGCCTGGAAGCACAGCCGGATGTTCTTTGGAAAAAACAAGGTGATGATGGTGGCCTTGGGTCGAAGC
CCCTCTGATGAGTACAAAGACAACCTGCACCAGGTCAGCAGGAAGCTGAAGGGTGAAGTTGGTCTCCTTTTCACCAATCG
AACTAAGGAGGAAGTGAACGAGTGGTTCACCAAGTTCACGGAGATGGACTATGCCCGAGCCGGTAACAAAGCATCCTTCT
CGGTGAGCCTGGATCCTGGGCCCCTGGAGCAGTTCCCGCACTCCATGGAGCCGCAGCTGAGGCAGCTAGGCCTGCCCACC
ACCCTCAAGAAAGGTGTGGTCACCCTGCTGTCTGACTACGAGGTGTGCAAGGAGGGCGACGTGCTGACACCGGAGCAGGC
CCGCGTCCTGAAGCTTTTTGGCTATGAGATGGCTGAGTTCAAAGTGACCATCAGGTACATGTGGGACGCACAGTCTGGAA
GGTTTGCGCAGATGGGCGACGACGACCTGCCAGAGAGTGCGGACGAGTCAGCAGAAGAGTCGGCAGAAGACAGCGACGAC
GACTGA
ATGCCCAAGTCCAAGCGGGACAAGAAAGTCTCCTTAACCAAAACTGCCAAGAAAGGCTTGGAACTGAAACAGAACCTAAT
AGAAGAGCTTCGGAAATGTGTGGACACATACAAGTACCTCTTCATCTTCTCCGTGGCCAACATGAGGAACAGCAAGCTGA
AGGACATCCGGAACGCCTGGAAGCACAGCCGGATGTTCTTTGGAAAAAACAAGGTGATGATGGTGGCCTTGGGTCGAAGC
CCCTCTGATGAGTACAAAGACAACCTGCACCAGGTCAGCAGGAAGCTGAAGGGTGAAGTTGGTCTCCTTTTCACCAATCG
AACTAAGGAGGAAGTGAACGAGTGGTTCACCAAGTTCACGGAGATGGACTATGCCCGAGCCGGTAACAAAGCATCCTTCT
CGGTGAGCCTGGATCCTGGGCCCCTGGAGCAGTTCCCGCACTCCATGGAGCCGCAGCTGAGGCAGCTAGGCCTGCCCACC
ACCCTCAAGAAAGGTGTGGTCACCCTGCTGTCTGACTACGAGGTGTGCAAGGAGGGCGACGTGCTGACACCGGAGCAGGC
CCGCGTCCTGAAGCTTTTTGGCTATGAGATGGCTGAGTTCAAAGTGACCATCAGGTACATGTGGGACGCACAGTCTGGAA
GGTTTGCGCAGATGGGCGACGACGACCTGCCAGAGAGTGCGGACGAGTCAGCAGAAGAGTCGGCAGAAGACAGCGACGAC
GACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015189 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006812 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000010119 | ortholog_one2one | 6 retrogenes | |
| Homo sapiens | ENSG00000053372 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000000533 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000000027 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000004019 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001566 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006695 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015874 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000016181 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000028741 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000274 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000010713 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001795 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000000262 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000017979 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000028112 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000006502 | ortholog_one2one | 8 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_1080 | 88.24 | 98.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_1162 | 83.44 | 61.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_etel_1172 | 88.37 | 52.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_etel_1887 | 99.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_etel_2177 | 81.28 | 83.82 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000001675 retrocopies