Parental gene:

CCNB1, ENSFCAG00000001572

Aliases:None
Description:cyclin B1 [Source:HGNC Symbol;Acc:1579]
Organism:Cat (Felis catus)
Coordinates:A1:136303585..136311564(+)


>ENSFCAG00000001572
ATGGCGCTCCGGGTCACCAGGAACACGAAAGTTAATGTTGAAAATAAGGCAAAGATCAGTATGGCAGGCGCAAAGCGCGT
GCCTCTGGCCACTGTTGCAGCCTCCAAGCCGGGACTGAGGCCAAGAACAGCCCTCGGAGACATTGGTAACAAAGTCAGTG
AACAGCCACAAGCCAAATTGCCTCTGAAAAAGGAAGCAAAAACTTTGGCTCCTGGAAAAGTTATTGCTAAAAAAATACCA
AAGCCTCTGGACAAAGCACCCGAGCCTGTGTCTGTACCTGTGCCAGAACCAGAGCCAGAACATGAGCCTGTTAAAGAAGA
AAAGCTTTCTCCGGAGCCTATTTTGGTTGATACTCCGTCTCCAAGCCCAATGGAAACGTCTGGATGTGCCCCTGCAGAAG
AATATCTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGTGAACGATGTGGATGCAGAAGATGGAGCTGATCCAAACCTT
TGTAGTGAATATGTGAAAGATATTTATGCTTATCTGAGACAACTTGAGGAAGAGCAAGCAGTAAGACCAAAATACCTCCT
GGGTCGTGAAGTCACCGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAGGTTCAAATGAAGTTCAGGTTACTGC
AGGAGACCATGTACATGACTGTTTCCATTATTGATCGGTTCATGCAGAATAATTGTGTACCCAAGAAGATGCTGCAGCTG
GTTGGTGTCACTGCCATGTTTATTGCAAGTAAATACGAAGAGATGTACCCTCCAGAAATTGGTGACTTTGCCTTTGTGAC
TGACAACACTTACACCAAGCACCAAATCAGACAGATGGAAATGAAGATTCTAAGATCTTTAAATTTTGGTCTGGGCCGCC
CTCTACCCCTGCATTTCCTTCGGAGAGCATCTAAGATTGGAGAGGTTGATGTTGAGCAACATACTTTGGCCAAATACCTG
ATGGAGCTAACTATGCTGGATTACGATATGGTGCACTTTCCTCCTTCTCAGATTGCAGCAGGAGCTTTTTGCCTAGCACT
AAAAATTCTCGACAATGGTGAATGGACACCAACTTTACAGCATTACCTGTCATACACTGAAGAATCCCTTCTAAATGTTA
TGCAACACCTGGCTAAGAATATAGTCATGGTGAATCGTGGGCTTACAAAGCACATGACTATCAAGAACAAGTATGCCACA
TCTAAGCATGCTAAGATCAGCACTCTAGCACAACTAAATTCTGCACTAGTTCAAGATTTAGCCAAGGCTGTGGCAAAGGT
GTAA

Library Parental gene expression (RPM)
SRP017611_liver 6 .17 RPM
SRP017611_kidney 1 .86 RPM
SRP017611_brain 1 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007705 ortholog_one2many 1 retrogene
retro_cfam_213,
Callithrix jacchus ENSCJAG00000016075 ortholog_one2one 1 retrogene
retro_cjac_4137,
Cavia porcellus ENSCPOG00000014629 ortholog_one2many 1 retrogene
retro_cpor_13,
Felis catus ENSFCAG00000000138 other_paralog 1 retrogene
retro_fcat_809,
Mustela putorius furo ENSMPUG00000014648 ortholog_one2many 1 retrogene
retro_mputfur_58,
Mus musculus ENSMUSG00000041431 ortholog_one2one 5 retrogenes
retro_mmus_1170, retro_mmus_1550, retro_mmus_2508, retro_mmus_2615, retro_mmus_3023,
Procavia capensis ENSPCAG00000002451 ortholog_one2one 1 retrogene
retro_pcap_176,
Rattus norvegicus ENSRNOG00000018635 ortholog_one2one 2 retrogenes
retro_rnor_568, retro_rnor_814,
Sarcophilus harrisii ENSSHAG00000007685 ortholog_one2one 1 retrogene
retro_shar_290,
Tupaia belangeri ENSTBEG00000011817 ortholog_one2many 4 retrogenes
retro_tbel_1185, retro_tbel_3200, retro_tbel_4185, retro_tbel_4531,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_840 89.57 64.87
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Download FASTA sequences of all ENSFCAG00000001572 retrocopies