Parental gene:

GRPEL2, ENSFCAG00000003624

Aliases:None
Description:GrpE-like 2, mitochondrial (E. coli) [Source:HGNC Symbol;Acc:21060]
Organism:Cat (Felis catus)
Coordinates:A1:197313258..197321393(-)


>ENSFCAG00000003624
ATGGCCGCGCGGTCAGTGTGGGCGGTCCGGCGGCTGGTGCAGCGCCTCCTGGCCTCGAGTGCCGCGTCCGAAGGCAGGGG
ACGGCTGCATCCTTTCAGCACCGCCACCCAGAGAACTGCTGGAGAGGACTGCAGTTCTGAGGACCCTCCCGATGACCTTG
GGCCCTCTCTTGCAGAACGAGCCTTAAAGCTTAAAGCTGTGAAACTGGAGAAAGAAGTCCAGGACTTAACAATGAGATAC
CAGAGAGCTGTAGCTGATGGTGAAAACATAAGGCGGCGAACCCAGAGATGTGTAGAAGATGCCAAGATATTTGGAATTCA
GAGTTTCTGTAAGGACTTGGTAGAGGTGGCAGACATTTTGGAGAAGACTACAGAGTACATTTCTGAAGAAACAGAGCCCG
GGGACCAGAAGCTCACTCTGGAGAAGATCTTCCGAGGGTTATCACTTTTAGAAGCAAAGCTGAAGAGTGTGTTTGCCAAA
CATGGCCTAGAGAAGATGACACCCATCGGTGACAAATACGACCCTCATGAGCATGAACTCATCTGTCACGTGCCCGCTGG
CGTTGGGGTACAGCCCGGCACCGTGGCATTAGTAAGGCAAGATGGCTACAAGCTTCATGGCCGCACCATTAGACTTGCCC
AGGTGGAAGTGGCCGTGGAGTCTCAGAGAAGACTATGA

Library Parental gene expression (RPM)
SRP017611_liver 1 .62 RPM
SRP017611_kidney 2 .16 RPM
SRP017611_brain 5 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004070 ortholog_one2one 1 retrogene
retro_chof_1984,
Dipodomys ordii ENSDORG00000011142 ortholog_one2one 1 retrogene
retro_dord_353,
Homo sapiens ENSG00000164284 ortholog_one2one 2 retrogenes
retro_hsap_1284, retro_hsap_4842,
Gorilla gorilla ENSGGOG00000005410 ortholog_one2one 2 retrogenes
retro_ggor_1008, retro_ggor_3021,
Macaca mulatta ENSMMUG00000021662 ortholog_one2one 1 retrogene
retro_mmul_1317,
Nomascus leucogenys ENSNLEG00000010160 ortholog_one2one 1 retrogene
retro_nleu_710,
Oryctolagus cuniculus ENSOCUG00000016138 ortholog_one2many 3 retrogenes
retro_ocun_89, retro_ocun_905, retro_ocun_943,
Otolemur garnettii ENSOGAG00000014326 ortholog_one2one 1 retrogene
retro_ogar_791,
Pongo abelii ENSPPYG00000015933 ortholog_one2one 2 retrogenes
retro_pabe_1063, retro_pabe_3764,
Pan troglodytes ENSPTRG00000017396 ortholog_one2one 2 retrogenes
retro_ptro_3226, retro_ptro_877,
Sorex araneus ENSSARG00000005467 ortholog_one2one 2 retrogenes
retro_sara_320, retro_sara_511,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_618 78.04 93.33
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000003624 retrocopies