Parental gene: | MCTS1, ENSFCAG00000008448 |
| Aliases: | None |
| Description: | malignant T cell amplified sequence 1 [Source:HGNC Symbol;Acc:23357] |
| Organism: | Cat (Felis catus) |
| Coordinates: | X:97858149..97867778(+) |
>ENSFCAG00000008448
ATGTTCAAGAAATTTGATGAAAAAGAAAACGTGTCTAACTGCATCCAGTTGAAAACCTCAGTTATAAAGGGTATTAAGAA
CCAATTGATAGAGCAATTTCCAGGTATTGAACCATGGCTTAATCAAATCATGCCTAAGAAAGATCCTGTCAAAATGGTTC
GATGCCATGAACATATAGAAATCCTTACAGTAAATGGAGAATTACTGTTTTTTAGACAAAGAGAAGGGCCTTTTTATCCA
ACCCTAAGGTTACTTCACAAATATCCTTTTATCCTGCCACACCAGCAGGTTGATAAAGGAGCCATCAAATTTGTTCTCAG
TGGAGCAAATATCATGTGTCCAGGCTTAACTTCTCCTGGAGCTCAACTTTACCCTGCTGCAGTAGATACAGTTGTTGCAA
TCATGGCAGAAGGAAAACAGCATGCTCTGTGTGTTGGAGTCATGAAGATGTCTGCAGAAGATATTGAGAAAGTCAACAAA
GGAATTGGCATTGAAAATATCCATTATTTAAATGATGGGCTGTGGCATATGAAGACATATAAATGA
ATGTTCAAGAAATTTGATGAAAAAGAAAACGTGTCTAACTGCATCCAGTTGAAAACCTCAGTTATAAAGGGTATTAAGAA
CCAATTGATAGAGCAATTTCCAGGTATTGAACCATGGCTTAATCAAATCATGCCTAAGAAAGATCCTGTCAAAATGGTTC
GATGCCATGAACATATAGAAATCCTTACAGTAAATGGAGAATTACTGTTTTTTAGACAAAGAGAAGGGCCTTTTTATCCA
ACCCTAAGGTTACTTCACAAATATCCTTTTATCCTGCCACACCAGCAGGTTGATAAAGGAGCCATCAAATTTGTTCTCAG
TGGAGCAAATATCATGTGTCCAGGCTTAACTTCTCCTGGAGCTCAACTTTACCCTGCTGCAGTAGATACAGTTGTTGCAA
TCATGGCAGAAGGAAAACAGCATGCTCTGTGTGTTGGAGTCATGAAGATGTCTGCAGAAGATATTGAGAAAGTCAACAAA
GGAATTGGCATTGAAAATATCCATTATTTAAATGATGGGCTGTGGCATATGAAGACATATAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .53 RPM |
| SRP017611_kidney | 2 .89 RPM |
| SRP017611_brain | 3 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000034992 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000018545 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000015462 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015101 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001407 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000000355 | possible_ortholog | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014315 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020687 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000011496 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_310 | 79.82 | 62.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_1009 | 98.34 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000008448 retrocopies