Parental gene: | RPL23, ENSFCAG00000014502 |
| Aliases: | None |
| Description: | ribosomal protein L23 [Source:HGNC Symbol;Acc:10316] |
| Organism: | Cat (Felis catus) |
| Coordinates: | E1:40150511..40156024(-) |
>ENSFCAG00000014502
ATGTCGAAGCGAGGACGTGGTGGGTCCTCCGGTGCGAAATTCCGGATTTCCCTGGGTCTTCCGGTCGGAGCCGTGATCAA
CTGCGCTGACAACACGGGAGCCAAAAATCTGTATATCATCTCTGTGAAGGGGATCAAAGGAAGACTGAATAGACTTCCTG
CTGCTGGCGTGGGTGACATGGTGATGGCCACAGTGAAGAAAGGCAAACCAGAGCTCAGAAAGAAGGTACATCCAGCAGTG
GTAATTCGACAACGAAAATCATACCGGAGAAAAGATGGAGTGTTCCTCTATTTTGAAGATAATGCGGGGGTCATAGTAAA
TAATAAAGGTGAAATGAAAGGTTCTGCCATCACAGGACCCGTTGCAAAGGAGTGTGCAGACTTGTGGCCCAGGATTGCAT
CCAATGCTGGCAGCATCGCATGA
ATGTCGAAGCGAGGACGTGGTGGGTCCTCCGGTGCGAAATTCCGGATTTCCCTGGGTCTTCCGGTCGGAGCCGTGATCAA
CTGCGCTGACAACACGGGAGCCAAAAATCTGTATATCATCTCTGTGAAGGGGATCAAAGGAAGACTGAATAGACTTCCTG
CTGCTGGCGTGGGTGACATGGTGATGGCCACAGTGAAGAAAGGCAAACCAGAGCTCAGAAAGAAGGTACATCCAGCAGTG
GTAATTCGACAACGAAAATCATACCGGAGAAAAGATGGAGTGTTCCTCTATTTTGAAGATAATGCGGGGGTCATAGTAAA
TAATAAAGGTGAAATGAAAGGTTCTGCCATCACAGGACCCGTTGCAAAGGAGTGTGCAGACTTGTGGCCCAGGATTGCAT
CCAATGCTGGCAGCATCGCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 158 .31 RPM |
| SRP017611_kidney | 394 .09 RPM |
| SRP017611_brain | 82 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004268 | possible_ortholog | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008311 | ortholog_one2one | 9 retrogenes | |
| Dipodomys ordii | ENSDORG00000001372 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000125691 | ortholog_one2one | 9 retrogenes | |
| Latimeria chalumnae | ENSLACG00000004430 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000004502 | possible_ortholog | 9 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000642 | possible_ortholog | 7 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000013915 | ortholog_one2one | 6 retrogenes | |
| Otolemur garnettii | ENSOGAG00000012445 | possible_ortholog | 7 retrogenes | |
| Ochotona princeps | ENSOPRG00000001957 | possible_ortholog | 10 retrogenes | |
| Rattus norvegicus | ENSRNOG00000004107 | possible_ortholog | 10 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000014279 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_242 | 71.63 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_296 | 77.14 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_716 | 70.59 | 60.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_fcat_756 | 73.94 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_fcat_859 | 58.47 | 81.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_fcat_1022 | 70.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_fcat_1431 | 73.47 | 69.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_fcat_1707 | 71.43 | 77.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_fcat_1708 | 76.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_fcat_1959 | 54.86 | 99.29 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000014502 retrocopies