Parental gene: | IMPDH1, ENSGGOG00000003963 |
| Aliases: | None |
| Description: | Inosine-5'-monophosphate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:G3QMZ1] |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 7:126504513..126522486(-) |
>ENSGGOG00000003963
ATGGAGGGGCCACTCACTCCACCACCGCTGCAGGGAGGCGGAGCCGCCGCTGTTCCGGAGCCCGGAGCCCGGCAACACTC
GGGACACGAGACGGCGGCGCAGCGGTACAGCGCCCGACTGCTGCAGGCCGGCTACGAGCCCGAGAGCCCTAGATTGGACC
TCGCTACACACCCGACGACACCCCGTTCAGAACTATCTTCAGTGGTCTTACTGGCAGGTGTTGGTGTCCAGATGGGTCGC
CTTCGCAGGGCTAGCATGGCGGACTACCTGATCAGCGGCGGCACCGGCTACGTGCCCGAGGATGGGCTCACCGCGCAGCA
GCTCTTCGCCAGCGCCGACGGCCTCACCTACAACGACTTCCTGATTCTCCCAGGATTCATAGACTTCATAGCTGATGAGG
TGGACCTGACCTCAGCCCTGACCCGGAAGATCACGCTGAAGACGCCGCTGATCTCCTCCCCCATGGACACTGTGACAGAG
GCTGACATGGCCATTGCCATGGCTCTGATGGGAGGTATTGGTTTCATTCACCACAACTGCACCCCAGAGTTCCAGGCCAA
CGAGGTGCGGAAGGTCAAGAAGTTTGAACAGGGCTTCATCACGGACCCCGTGGTGCTGAGCCCCTCGCACACTGTGGGCG
ATGTGCTGGAGGCCAAGATGCGGCATGGCTTCTCTGGCATCCCCATCACTGAGACGGGCACCATGGGCAGCAAGCTGGTG
GGCATCGTCACCTCCCGAGACATCGACTTTCTTGCTGAGAAGGACCACACCACCCTCCTCAGTGAGGTGATGACGCCAAG
GATTGAACTGGTGGTGGCTCCAGCAGGTGTGACGTTGAAAGAGGCAAATGAGATCCTGCAGCGTAGCAAGAAAGGGAAGC
TGCCTATCGTCAATGATCGCGATGAGCTGGTGGCCATCATCGCCCGCACCGACCTGAAGAAGAACCGAGACTACCCTCTG
GCCTCCAAGGATTCCCAGAAGCAGCTGCTCTGTGGGGCAGCTGTGGGCACCCGTGAGGATGACAAATACCGTCTGGACCT
GCTCACCCAGGCGGGCGTCGACGTCATAGTCTTGGACTCGTCCCAAGGGAATTCGGTGTATCAGATCGCCATGGTGCATT
ACATCAAACAGAAGTACCCCCACCTCCAGGTGATTGGGGGGAACGTGGTGACAGCAGCCCAGGCCAAGAACCTGATTGAT
GCTGGTGTGGACGGGCTGCGCGTGGGCATGGGCTGCGGCTCCATCTGCATCACCCAGGAAGTGATGGCCTGTGGTCGGCC
CCAGGGCACTGCTGTGTACAAGGTGGCTGAGTATGCCCGGCGCTTTGGTGTGCCCATCATAGCCGATGGCGGCATCCAGA
CCGTGGGACACGTGGTCAAGGCCCTGGCCCTTGGAGCTTCCACAGTGATGATGGGCTCCCTGCTGGCCGCCACTACGGAG
GCCCCTGGCGAGTACTTCTTCTCAGACGGGGTGCGGCTCAAGAAGTACCGGGGCATGGGCTCACTGGATGCCATGGAGAA
GAGCAGCAGCAGCCAGAAACGATACTTCAGCGAGGGGGATAAAGTGAAGATCGCACAGGGTGTCTCGGGCTCCATCCAGG
ACAAAGGATCCATTCAGAAGTTCGTGCCCTACCTCATAGCAGGCATCCAACACGGCTGCCAGGATATCGGGGCCCGCAGC
CTGTCTGTCCTTCGGTCCATGATGTACTCAGGAGAGCTCAAGTTTGAGAAGCGGACCATGTCGGCCCAGATTGAGGGTGG
TGTCCATGGCCTGCACTCTTACGAAAAGCGGCTGTACTGA
ATGGAGGGGCCACTCACTCCACCACCGCTGCAGGGAGGCGGAGCCGCCGCTGTTCCGGAGCCCGGAGCCCGGCAACACTC
GGGACACGAGACGGCGGCGCAGCGGTACAGCGCCCGACTGCTGCAGGCCGGCTACGAGCCCGAGAGCCCTAGATTGGACC
TCGCTACACACCCGACGACACCCCGTTCAGAACTATCTTCAGTGGTCTTACTGGCAGGTGTTGGTGTCCAGATGGGTCGC
CTTCGCAGGGCTAGCATGGCGGACTACCTGATCAGCGGCGGCACCGGCTACGTGCCCGAGGATGGGCTCACCGCGCAGCA
GCTCTTCGCCAGCGCCGACGGCCTCACCTACAACGACTTCCTGATTCTCCCAGGATTCATAGACTTCATAGCTGATGAGG
TGGACCTGACCTCAGCCCTGACCCGGAAGATCACGCTGAAGACGCCGCTGATCTCCTCCCCCATGGACACTGTGACAGAG
GCTGACATGGCCATTGCCATGGCTCTGATGGGAGGTATTGGTTTCATTCACCACAACTGCACCCCAGAGTTCCAGGCCAA
CGAGGTGCGGAAGGTCAAGAAGTTTGAACAGGGCTTCATCACGGACCCCGTGGTGCTGAGCCCCTCGCACACTGTGGGCG
ATGTGCTGGAGGCCAAGATGCGGCATGGCTTCTCTGGCATCCCCATCACTGAGACGGGCACCATGGGCAGCAAGCTGGTG
GGCATCGTCACCTCCCGAGACATCGACTTTCTTGCTGAGAAGGACCACACCACCCTCCTCAGTGAGGTGATGACGCCAAG
GATTGAACTGGTGGTGGCTCCAGCAGGTGTGACGTTGAAAGAGGCAAATGAGATCCTGCAGCGTAGCAAGAAAGGGAAGC
TGCCTATCGTCAATGATCGCGATGAGCTGGTGGCCATCATCGCCCGCACCGACCTGAAGAAGAACCGAGACTACCCTCTG
GCCTCCAAGGATTCCCAGAAGCAGCTGCTCTGTGGGGCAGCTGTGGGCACCCGTGAGGATGACAAATACCGTCTGGACCT
GCTCACCCAGGCGGGCGTCGACGTCATAGTCTTGGACTCGTCCCAAGGGAATTCGGTGTATCAGATCGCCATGGTGCATT
ACATCAAACAGAAGTACCCCCACCTCCAGGTGATTGGGGGGAACGTGGTGACAGCAGCCCAGGCCAAGAACCTGATTGAT
GCTGGTGTGGACGGGCTGCGCGTGGGCATGGGCTGCGGCTCCATCTGCATCACCCAGGAAGTGATGGCCTGTGGTCGGCC
CCAGGGCACTGCTGTGTACAAGGTGGCTGAGTATGCCCGGCGCTTTGGTGTGCCCATCATAGCCGATGGCGGCATCCAGA
CCGTGGGACACGTGGTCAAGGCCCTGGCCCTTGGAGCTTCCACAGTGATGATGGGCTCCCTGCTGGCCGCCACTACGGAG
GCCCCTGGCGAGTACTTCTTCTCAGACGGGGTGCGGCTCAAGAAGTACCGGGGCATGGGCTCACTGGATGCCATGGAGAA
GAGCAGCAGCAGCCAGAAACGATACTTCAGCGAGGGGGATAAAGTGAAGATCGCACAGGGTGTCTCGGGCTCCATCCAGG
ACAAAGGATCCATTCAGAAGTTCGTGCCCTACCTCATAGCAGGCATCCAACACGGCTGCCAGGATATCGGGGCCCGCAGC
CTGTCTGTCCTTCGGTCCATGATGTACTCAGGAGAGCTCAAGTTTGAGAAGCGGACCATGTCGGCCCAGATTGAGGGTGG
TGTCCATGGCCTGCACTCTTACGAAAAGCGGCTGTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 30 .79 RPM |
| SRP007412_cerebellum | 31 .20 RPM |
| SRP007412_heart | 12 .45 RPM |
| SRP007412_kidney | 10 .79 RPM |
| SRP007412_liver | 6 .25 RPM |
| SRP007412_testis | 21 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017770 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000106348 | ortholog_one2one | 7 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013245 | within_species_paralog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000016082 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000014509 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012341 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017976 | ortholog_one2one | 7 retrogenes | |
| Pan troglodytes | ENSPTRG00000019660 | ortholog_one2one | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1790 | 86.14 | 67.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1798 | 84.35 | 55.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1827 | 86.08 | 55.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2551 | 85.53 | 76.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_2688 | 83.78 | 87.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ggor_2993 | 89.73 | 91.47 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000003963 retrocopies