Parental gene:

MDH1, ENSGGOG00000007085

Aliases:None
Description:Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:G3QVZ2]
Organism:Gorilla (Gorilla gorilla)
Coordinates:2a:64783972..64802141(+)


>ENSGGOG00000007085
ATGTCTGAACCAATCAGAGTCCTTGTGACTGGAGCAGCTGGTCAAATTGCATATTCACTGCTGTACAGTATTGGAAATGG
ATCTGTCTTTGGTAAAGATCAGCCTATAATTCTTGTGCTGTTGGATATCACCCCCATGATGGGTGTCCTGGACGGTGTCT
TAATGGAACTGCAAGACTGTGCCCTTCCCCTCCTGAAAGATGTCATCGCAACAGATAAAGAAGAGGTTGCCTTCAAAGAC
CTGGATGTGGCCATTCTTGTGGGCTCCATGCCAAGAAGGGAAGGCATGGAGAGAAAAGATTTACTGAAAGCAAATGTGAA
AATCTTCAAATCCCAGGGTGCAGCCTTAGATAAATACGCCAAGAAGTCAGTTAAGGTTATTGTTGTGGGTAATCCAGCCA
ATACCAACTGCCTGACTGCTTCCAAGTCGGCTCCATCCATCCCCAAGGAGAACTTCAGTTGCTTGACTCGTTTGGATCAC
AACCGAGCTAAAGCTCAAGTTGCTCTTAAACTTGGTGTGACTGCTAATGATGTAAAGAATGTCATTATCTGGGGAAACCA
TTCCTCGACTCAGTATCCAGATGTCAACCATGCCAAGGTGAAATTGCAAGGAAAGGAAGTTGGTGTTTATGAAGCTCTGA
AAGATGACAGCTGGCTCAAGGGAGAATTTGTCACGACTGTGCAGCAGCGTGGCGCTGCTGTCATCAAGGCTCGAAAACTA
TCCAGTGCCATGTCTGCTGCAAAAGCCATCTGTGACCACGTCAGGGACATCTGGTTTGGAACCCCAGAGGGAGAGTTTGT
GTCCATGGGTGTTATCTCTGATGGCAACTCCTATGGTGTTCCTGATGATCTGCTCTACTCATTCCCTGTTGTAATCAAGA
ATAAAACCTGGAAGTTTGTTGAAGGTCTCCCTATTAATGATTTCTCACGTGAGAAGATGGATCTTACTGCAAAGGAACTG
ACAGAAGAAAAAGAAAGTGCTTTTGAATTTCTTTCCTCTGCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 290 .46 RPM
SRP007412_cerebellum 96 .01 RPM
SRP007412_heart 143 .90 RPM
SRP007412_kidney 199 .58 RPM
SRP007412_liver 75 .28 RPM
SRP007412_testis 46 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019295 ortholog_one2one 1 retrogene
retro_btau_466,
Choloepus hoffmanni ENSCHOG00000007281 ortholog_one2one 5 retrogenes
retro_chof_1260, retro_chof_1513, retro_chof_1892, retro_chof_2001, retro_chof_90,
Callithrix jacchus ENSCJAG00000007018 ortholog_one2many 4 retrogenes
retro_cjac_1848, retro_cjac_2407, retro_cjac_2418, retro_cjac_282,
Dasypus novemcinctus ENSDNOG00000013329 ortholog_one2one 2 retrogenes
retro_dnov_109, retro_dnov_2562,
Homo sapiens ENSG00000014641 ortholog_one2one 1 retrogene
retro_hsap_3426,
Loxodonta africana ENSLAFG00000016504 ortholog_one2one 2 retrogenes
retro_lafr_1134, retro_lafr_972,
Macaca mulatta ENSMMUG00000006163 ortholog_one2one 2 retrogenes
retro_mmul_1750, retro_mmul_2496,
Nomascus leucogenys ENSNLEG00000009823 ortholog_one2one 1 retrogene
retro_nleu_1363,
Otolemur garnettii ENSOGAG00000014487 ortholog_one2many 1 retrogene
retro_ogar_741,
Pongo abelii ENSPPYG00000012373 ortholog_one2one 1 retrogene
retro_pabe_2839,
Pan troglodytes ENSPTRG00000011974 ortholog_one2one 1 retrogene
retro_ptro_2326,
Sorex araneus ENSSARG00000007690 ortholog_one2one 1 retrogene
retro_sara_361,
Sus scrofa ENSSSCG00000025751 ortholog_one2many 1 retrogene
retro_sscr_779,
Tarsius syrichta ENSTSYG00000001215 ortholog_one2one 2 retrogenes
retro_tsyr_1790, retro_tsyr_190,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2316 67.83 68.26
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000007085 retrocopies