Parental gene:

PSMD7, ENSGGOG00000009774

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:16:64636995..64646407(+)


>ENSGGOG00000009774
ATGCCGGAGCTGGCGGTGCAGAAGGTGGTGGTCCACCCCCTGGTGCTGCTCAGTGTGGTGGATCATTTCAACCGAATCGG
CAAGGTTGGAAACCAGAAGCGTGTTGTTGGTGTGCTTTTGGGGTCATGGCAAAAGAAAGTACTTGATGTATCGAACAGTT
TTGCAGTTCCTTTTGATGAAGATGACAAAGACGATTCTGTATGGTTTTTAGACCATGATTATTTGGAAAACATGTATGGA
ATGTTTAAGAAAGTCAATGCCAGGGAAAGAATAGTTGGCTGGTACCACACAGGCCCTAAACTACACAAGAATGACATTGC
CATCAACGAACTCATGAAAAGATACTGTCCTAATTCCGTATTGGTCATCATTGATGTGAAGCCGAAGGACCTAGGGCTGC
CTACAGAAGCGTACATTTCAGTGGAAGAAGTCCATGATGATGGAACTCCAACCTCGAAAACATTTGAACACGTGACCAGT
GAAATTGGAGCAGAGGAAGCTGAGGAAGTTGGAGTTGAACACTTGTTACGAGATATCAAAGACACGACGGTGGGGACTCT
GTCCCAGCGGATCACAAACCAGGTCCATGGTTTGAAGGGACTGAACTCCAAGCTTCTGGATATCAGGAGCTACCTGGAAA
AAGTCGCCACAGGCAAGCTGCCCATCAACCACCAGATCATCTACCAGCTGCAGGATGTCTTCAACCTGCTGCCAGACGTC
AGCCTGCAGGAGTTCGTCAAGGCCTTTTACCTGAAGACCAATGACCAGATGGTGGTAGTGTACTTGGCCTCGCTGATCCG
TTCCGTGGTCGCCCTGCACAACCTCATCAACAACAAGATTGCCAACCGGGATGCAGAGAAGAAAGAAGGGCAGGAGAAAG
AAGAGAGCAAAAAGGATAGGAAAGAGGACAAGGAGAAAGATAAAGATAAGGAAAAGAGTGATGTAAAGAAAGAGGAGAAA
AAGGAGAAAAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 74 .57 RPM
SRP007412_cerebellum 45 .54 RPM
SRP007412_heart 27 .96 RPM
SRP007412_kidney 55 .12 RPM
SRP007412_liver 44 .31 RPM
SRP007412_testis 99 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015129 ortholog_one2one 2 retrogenes
retro_cjac_1520, retro_cjac_2910,
Homo sapiens ENSG00000103035 ortholog_one2one 2 retrogenes
retro_hsap_1781, retro_hsap_234,
Gorilla gorilla ENSGGOG00000011702 within_species_paralog 5 retrogenes
retro_ggor_1566, retro_ggor_1567, retro_ggor_1568, retro_ggor_1589, retro_ggor_1590,
Myotis lucifugus ENSMLUG00000005416 ortholog_one2many 1 retrogene
retro_mluc_505,
Macaca mulatta ENSMMUG00000011125 ortholog_one2one 4 retrogenes
retro_mmul_1242, retro_mmul_372, retro_mmul_417, retro_mmul_566,
Nomascus leucogenys ENSNLEG00000005608 ortholog_one2one 1 retrogene
retro_nleu_1310,
Otolemur garnettii ENSOGAG00000014868 possible_ortholog 1 retrogene
retro_ogar_388,
Procavia capensis ENSPCAG00000014356 ortholog_one2many 1 retrogene
retro_pcap_399,
Pongo abelii ENSPPYG00000025918 ortholog_one2many 1 retrogene
retro_pabe_418,
Pan troglodytes ENSPTRG00000008343 ortholog_one2one 2 retrogenes
retro_ptro_1192, retro_ptro_205,
Ictidomys tridecemlineatus ENSSTOG00000013123 possible_ortholog 1 retrogene
retro_itri_1665,
Tupaia belangeri ENSTBEG00000016950 ortholog_one2one 1 retrogene
retro_tbel_4135,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2235 89.13 56.48
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Download FASTA sequences of all ENSGGOG00000009774 retrocopies