Parental gene: | CHAF1B, ENSGGOG00000015726 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 21:24828895..24861197(+) |
>ENSGGOG00000015726
ATGAAAGTCATCACTTGTGAAATAGCCTGGCACAACAAGGAGCCCGTGTACAGCCTGGACTTCCAGCATGGGACGGCTGG
GAGGATCCACAGACTGGCGTCTGCCGGCGTGGACACCAATGTCAGGATCTGGAAGGTAGAAAAGGGACCAGATGGAAAAG
CCATCGTGGAATTTTTGTCCAATCTTGCTCGTCATACCAAAGCCGTCAATGTTGTGCGTTTTTCTCCAACTGGGGAAATT
TTAGCATCGGGAGGAGATGATGCTGTCATCCTGTTGTGGAAGGTGAATGATAACAAGGAGGCGGAGCAGATCGCTTTTCA
GGATGAGGATGAGGCCCAGCTGAACAAGGAGAACTGGACGGTTGTGAAGACTCTGCGGGGCCACTTAGAAGATGTGTATG
ATATTTGCTGGGCAACTGATGGGAATTTAATGGCTTCTGCCTCTGTGGATAACACAGCCATCATATGGGATGTCAGCAAA
GGACAAAAGATATCAATTTTTAATGAACATAAAAGTTATGTCCAAGGAGTAACCTGGGACCCTTTGGGTCAATATGTTGC
TACTCTGAGCTGTGACAGGGTGCTGCGAGTATACATTATACAGAAGAAGCGTGTGGCTTTCAATGTTTCGAAGATGCTGT
CTGGAGTAGGGGCTGAAGGAGAGGCAAGAAGCTACCGGATGTTTCACGACGACAGCATGAAGTCTTTCTTTCGCAGACTG
AGTTTCACTCCCGACGGATCTTTGCTCCTCACGCCAGCTGGATGTGTGGAATCTGGTGAAAATGTAATGAATACCACTTA
TGTTTTCTCCAGGAAGAATCTTAAAAGGCCCATCGCTCATCTTCCATGTCCTGGAAAAGCCACTCTTGCTGTTCGCTGCT
GTCCGGTCTACTTTGAACTGAGGCCAGTGGTGGAAACAGGTGTGGAGCTGATGAGTCTGCCCTACCGCCTGGTGTTTGCT
GTGGCCTCGGAGGACTCCGTGCTTCTGTATGACACCCAGCAGTCCTTCCCTTTTGGTTACGTGTCTAATATACATTACCA
CACCCTCAGTGACATTTCATGGTCCAGCGATGGTGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCATTTGTGA
CATTTGAGAAAGATGAACTTGGAATTCCTTTGAAAGAGAAGCCAGTTTTGAGCATGAGAACTCCTGATACAGCAAAGAAA
ACCAAGAGTCAGACACATCGAGGGTCTTCGCCAGGACCCAGACCGGTAGAGGGAACCCCTGCCAGCAGAACCCAAGACCC
CAGCAGCCCCGGCACGACCCCCCCTCAGGCCAGACAGGCCCCAGCCCCAACAGTCATCAGGGACCCTCCCTCCATCACTC
CTGCTGTCAAAAGCCCCTTGCCGGGGCCTTCGGAGGAGAAGACCCTGCAGCCCAGTAGTCAAAACACAAAAGCCCACCCA
TCCCGGAGGGTCACTCTGAACACACTGCAAGCCTGGAGCAAGACAACACCCCGATCAAGGAGAATAAACTTAACACCCTT
AAAGACAGACACTCCACCAAGTTCTGTACCAACCAGTGTGATTTCCACCCCTTCTACAGAAGAAATTCAGTCAGAGACGC
CTGGAGACGCTCAGGGCAGTCCCCCAGAGCTAAAGCGGCCCAGACTCGATGAAAACAAAGGAGGCACGGAAAGTCTGGAC
CCTTGA
ATGAAAGTCATCACTTGTGAAATAGCCTGGCACAACAAGGAGCCCGTGTACAGCCTGGACTTCCAGCATGGGACGGCTGG
GAGGATCCACAGACTGGCGTCTGCCGGCGTGGACACCAATGTCAGGATCTGGAAGGTAGAAAAGGGACCAGATGGAAAAG
CCATCGTGGAATTTTTGTCCAATCTTGCTCGTCATACCAAAGCCGTCAATGTTGTGCGTTTTTCTCCAACTGGGGAAATT
TTAGCATCGGGAGGAGATGATGCTGTCATCCTGTTGTGGAAGGTGAATGATAACAAGGAGGCGGAGCAGATCGCTTTTCA
GGATGAGGATGAGGCCCAGCTGAACAAGGAGAACTGGACGGTTGTGAAGACTCTGCGGGGCCACTTAGAAGATGTGTATG
ATATTTGCTGGGCAACTGATGGGAATTTAATGGCTTCTGCCTCTGTGGATAACACAGCCATCATATGGGATGTCAGCAAA
GGACAAAAGATATCAATTTTTAATGAACATAAAAGTTATGTCCAAGGAGTAACCTGGGACCCTTTGGGTCAATATGTTGC
TACTCTGAGCTGTGACAGGGTGCTGCGAGTATACATTATACAGAAGAAGCGTGTGGCTTTCAATGTTTCGAAGATGCTGT
CTGGAGTAGGGGCTGAAGGAGAGGCAAGAAGCTACCGGATGTTTCACGACGACAGCATGAAGTCTTTCTTTCGCAGACTG
AGTTTCACTCCCGACGGATCTTTGCTCCTCACGCCAGCTGGATGTGTGGAATCTGGTGAAAATGTAATGAATACCACTTA
TGTTTTCTCCAGGAAGAATCTTAAAAGGCCCATCGCTCATCTTCCATGTCCTGGAAAAGCCACTCTTGCTGTTCGCTGCT
GTCCGGTCTACTTTGAACTGAGGCCAGTGGTGGAAACAGGTGTGGAGCTGATGAGTCTGCCCTACCGCCTGGTGTTTGCT
GTGGCCTCGGAGGACTCCGTGCTTCTGTATGACACCCAGCAGTCCTTCCCTTTTGGTTACGTGTCTAATATACATTACCA
CACCCTCAGTGACATTTCATGGTCCAGCGATGGTGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCATTTGTGA
CATTTGAGAAAGATGAACTTGGAATTCCTTTGAAAGAGAAGCCAGTTTTGAGCATGAGAACTCCTGATACAGCAAAGAAA
ACCAAGAGTCAGACACATCGAGGGTCTTCGCCAGGACCCAGACCGGTAGAGGGAACCCCTGCCAGCAGAACCCAAGACCC
CAGCAGCCCCGGCACGACCCCCCCTCAGGCCAGACAGGCCCCAGCCCCAACAGTCATCAGGGACCCTCCCTCCATCACTC
CTGCTGTCAAAAGCCCCTTGCCGGGGCCTTCGGAGGAGAAGACCCTGCAGCCCAGTAGTCAAAACACAAAAGCCCACCCA
TCCCGGAGGGTCACTCTGAACACACTGCAAGCCTGGAGCAAGACAACACCCCGATCAAGGAGAATAAACTTAACACCCTT
AAAGACAGACACTCCACCAAGTTCTGTACCAACCAGTGTGATTTCCACCCCTTCTACAGAAGAAATTCAGTCAGAGACGC
CTGGAGACGCTCAGGGCAGTCCCCCAGAGCTAAAGCGGCCCAGACTCGATGAAAACAAAGGAGGCACGGAAAGTCTGGAC
CCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .48 RPM |
| SRP007412_cerebellum | 7 .60 RPM |
| SRP007412_heart | 0 .59 RPM |
| SRP007412_kidney | 1 .39 RPM |
| SRP007412_liver | 1 .58 RPM |
| SRP007412_testis | 7 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000159259 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004429 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011403 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013891 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_2369 | 83.76 | 69.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000015726 retrocopies