Parental gene:

PAFAH1B2, ENSGGOG00000028197

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:11:115058174..115073849(+)


>ENSGGOG00000028197
ATGAGCCAAGGAGACTCAAACCCAGCAGCTATTCCGCATGCAGCAGAAGATATTCAAGGAGATGACCGATGGATGTCTCA
GCACAACAGATTTGTTTTGGACTGTAAAGACAAAGAGCCTGATGTACTGTTCGTGGGAGACTCCATGGTGCAGTTAATGC
AGCAATATGAGATATGGCGAGAGCTTTTTTCCCCACTTCATGCACTGAATTTTGGAATTGGGGGAGATACAACAAGACAT
GTTTTGTGGAGACTAAAGAATGGAGAACTGGAGAATATTAAGCCTAAGGTGAAATTGTACCTGTGTATTTATACCACAAA
TAGGGAAAGAAGAAAGGTGAGCAGAGGAGGCTGCATAAAGTTTGAGCCTGGGATGGTTAGGAGAAAGAGGCCACAACCAG
GTCATGTAGGATTTGGTTTGTTACCTCGAGGTGAGAAACCCAATCCTTTGAGGCAAAAGAACGCCAAGGTGAACCAACTT
CTCAAGGTTTCGCTGCCGAAGCTTGCCAACGTGCAGCTCCTGGATACCGACGGGGGTTTTGTGCACTCGGACGGTGCCAT
CTCCTGCCACGACATGTTTGATTTTCTGCATCTGACAGGAGGGGGCTATGCAAAGATCTGCAAACCCCTGCATGAACTGA
TCATGCAGTTGTTGGAGGAAACACCTGAGGAGAAACAAACCACCATTGCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 21 .77 RPM
SRP007412_cerebellum 15 .92 RPM
SRP007412_heart 3 .44 RPM
SRP007412_kidney 10 .51 RPM
SRP007412_liver 5 .70 RPM
SRP007412_testis 22 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008628 ortholog_one2one 2 retrogenes
retro_amel_1145, retro_amel_818,
Canis familiaris ENSCAFG00000013226 ortholog_one2one 1 retrogene
retro_cfam_1335,
Callithrix jacchus ENSCJAG00000012698 ortholog_one2one 1 retrogene
retro_cjac_3325,
Dipodomys ordii ENSDORG00000011274 ortholog_one2one 1 retrogene
retro_dord_560,
Felis catus ENSFCAG00000029945 ortholog_one2one 1 retrogene
retro_fcat_270,
Homo sapiens ENSG00000168092 ortholog_one2one 2 retrogenes
retro_hsap_1148, retro_hsap_4661,
Macaca mulatta ENSMMUG00000002050 ortholog_one2one 2 retrogenes
retro_mmul_2481, retro_mmul_892,
Mustela putorius furo ENSMPUG00000004246 ortholog_one2one 1 retrogene
retro_mputfur_898,
Nomascus leucogenys ENSNLEG00000007337 ortholog_one2one 2 retrogenes
retro_nleu_1096, retro_nleu_946,
Pongo abelii ENSPPYG00000003907 ortholog_one2one 2 retrogenes
retro_pabe_3621, retro_pabe_953,
Pan troglodytes ENSPTRG00000004318 ortholog_one2one 2 retrogenes
retro_ptro_3097, retro_ptro_782,
Rattus norvegicus ENSRNOG00000018032 ortholog_one2one 1 retrogene
retro_rnor_2585,
Sarcophilus harrisii ENSSHAG00000011403 ortholog_one2one 1 retrogene
retro_shar_617,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_893 70.00 52.17
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ggor_2893 73.16 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000028197 retrocopies