Parental gene: | VAMP4, ENSMEUG00000011226 |
| Aliases: | None |
| Description: | vesicle-associated membrane protein 4 [Source:HGNC Symbol;Acc:12645] |
| Organism: | Wallaby (Macropus eugenii) |
| Coordinates: | GeneScaffold_3152:16523..35600(-) |
>ENSMEUG00000011226
ATGCCTCCTAAATTCAAGCGCCACCTAAATGATGATGATGTCACTGGTTCTGTGAAGAGTGAAAGGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGGCCCATCTGGACCAAAATTTGGACCTCGGAATGACAAAATTA
GGCATGTACAGAATCAGGTGGATGAAGTAATTGATGTCATGCAAGAGAATATTACAAAAGTGATTGAAAGAGGAGAGAGA
CTGGATGAGCTGCAAGACAAATCAGAAAGCTTATCAGATAATGCAACAGCTTTTAGCAACAGATCTAAACAGCTTCGAAG
ACAAATGTGGTGGCGTGGATGCAAAATGAAGGCCATCGTGGCTCTGGTTGCTCTCATCCTCTTGCTGGTGATTATCATTC
CTATTGTCCTGAAATATCGGACTTGA
ATGCCTCCTAAATTCAAGCGCCACCTAAATGATGATGATGTCACTGGTTCTGTGAAGAGTGAAAGGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGGCCCATCTGGACCAAAATTTGGACCTCGGAATGACAAAATTA
GGCATGTACAGAATCAGGTGGATGAAGTAATTGATGTCATGCAAGAGAATATTACAAAAGTGATTGAAAGAGGAGAGAGA
CTGGATGAGCTGCAAGACAAATCAGAAAGCTTATCAGATAATGCAACAGCTTTTAGCAACAGATCTAAACAGCTTCGAAG
ACAAATGTGGTGGCGTGGATGCAAAATGAAGGCCATCGTGGCTCTGGTTGCTCTCATCCTCTTGCTGGTGATTATCATTC
CTATTGTCCTGAAATATCGGACTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016956 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000000124 | ortholog_one2many | 4 retrogenes | |
| Felis catus | ENSFCAG00000013371 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000003811 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015609 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015967 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000026745 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000014342 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000001709 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017179 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000010829 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000007424 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_meug_75 | 67.91 | 95.04 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_meug_115 | 72.15 | 56.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_meug_163 | 53.61 | 65.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_meug_319 | 76.40 | 63.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_meug_386 | 85.04 | 90.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_meug_569 | 66.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_meug_1053 | 87.50 | 51.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_meug_1257 | 59.76 | 57.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_meug_1406 | 53.61 | 65.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_meug_1489 | 55.67 | 65.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_meug_1587 | 56.39 | 94.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_meug_2075 | 54.74 | 64.54 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_meug_2154 | 75.00 | 51.06 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMEUG00000011226 retrocopies