Parental gene:

ZC3H11A, ENSMODG00000001184

Aliases:None
Description:zinc finger CCCH-type containing 11A [Source:HGNC Symbol;Acc:29093]
Organism:Opossum (Monodelphis domestica)
Coordinates:2:108313082..108363353(+)


>ENSMODG00000001184
ATGTCTAATCAAGGAGAAGACTGCTACTTTTTTTTCTATTCTACATGTACCAAGGGAGATAGTTGCCCATTCCGGCACTG
TGAAGCTGCCCTAGGAAATGAAACTGTTTGCACATTGTGGCAGGAAGGGCGCTGTTTTCGGCAGGTCTGCAGGTTCCGAC
ACATGGAAATTGATAAAAAGCGGAGTGAGATTCCATGCTACTGGGAAAACCAGCCAATGGGATGTCAAAAACTAAATTGT
GCTTTTCATCACAACAGGGGACGCTATGTTGAAGGCCTTTTCCTACCTCCAAGCAAAACTATTTTACCCCTTGTGCCTGA
GTCGCCAGATGAAGAGGTGAAATCTAGTCAGCTCTCAATGCAGCAGAACAAACTGTCTGTTCAGTCCAATCCCTCTCCTC
AGCTTCGAGGGGTAATGAAAGTGGAAAGTTCAGAAAATGTCCCCAGCCCCACACATCCTCCAGTTGTAATCAATGCTGCA
GATGATGATGAGGATGACGATGATCAGTTTTCTGAAGAAGGAGATGAAACTAAAACACCTATTCTGCAACCAGCTCCTGA
AGTTCATAATGGATTACGCATAACTGGTGCTCGGAAGCCAGGGGTCAGCTTAAAGCAAGGAGATAGTTTGAATTTTGGAA
TAAAAACCCTTGAAGAAATCAAATCAAAGAAAATGAAGGAAAAATCTAAGAAGCAAGGAGAAGGGCCTTCAGGAGCATGT
GCTCATTTACTTCAACCTCAACCCATTCCAGGTCCTGAAAAAGAGAATGTCAGAACTGTGGTGAGGACAGTAACCCTGTC
CAACAAACAAGGAGAAGAGCCCTTGGTACGATTGAGTCTCACAGAAAGACTAGGGAAACGGAAACTCTCAGGTGTTGACA
GTGACCCTCCACTGAAGCGAAGCCTTGCTCAAAGGCTTGGGAAGAAAATTGAGTCTCCAGAAATGAATACTGACAAAACA
CCAAAGAAAGTTCAAGTTTCCAAGTCTCTGAAGGAGAGATTAGGAATGCCAGCTGATCTAAACAGTATGGAGACAACAGA
AAGATCTGCTAAAGGTGGAGAGATCCATGTGAAGACACTAGAAGAAATACGTCTTGAGAGAGCCAGCCAAAAACGAGGAG
AATTGCTTACCAAAATCAAGAATGAAGGACCCCATAAGCCTGAAGATTCCAATTTGGGGATGAGGAGCTCCTCTGCTATC
CGAATCAAAACATTTTCTGAGGTCCTGGCTGAAAAGAAACACCGACAGCAGGAAGAAGAGAGACAGAAAGCTGAGAAGGA
AAACCCTTCTGTCAAGCTCAGAATAGAGAGTGAGTCTAAGAAACCAGCCATCTTGCCTCCCAGCACTACCAGCAAAGGGC
AGCTGGAAGAGCCTGCAATGAAAACCAAGCCCATGCAGGAGGTACACATAAAAACTTTGGAGGAAATCAAACAGGAAAAA
GCATTGAGAGTGCAACAGAGTGCTGAGAACAGCACCAGCTCCCAGACACAGCCTGAGACTACTCCAATCATAAGACGACT
TCTCCGCATCACCAAAAGAACAGGTGTAAAGGAAGAGAAGAAACTTAGTGAAGCAGGTGAAACCACATCTCGAATTGGTG
TTAGCAGGACAGAGGCTGTTGAGGTTTCTTCACAGACTTCTGATGAGACCACAGGAGATAGCATTTCCAAAGTTCAAGTC
AAGAAATTCGAGGATATCATGAGAGAGAAGCGCATGCAGAAGCAGCAAGAGGTAGAAATGCTACCAAAGGATAAGGTTCT
GACACCCCTTCAGGAAGAAGCAGCACCCAGTAACACCCAAGTGGTAGAGAAATCAGAACTGAATACTGTATCAGGAATCA
CCCGCCAGCTGACAAAACGCATGCCAATAAAAGCCCAGCAAGTAGAGCTAGAAACTTCAGGAATTGGGGATTCAATCCTG
AATGTGAAATGTGCAGCACAACCCTTGGAAAAAAGGGGTAAAGCCAAGCCCAAGGTTAATGTCAAGCCATCTGTGGTTAA
AGTCATTTCAACCCCTAAATTGGCCACAAAACGCAAAGCAGCTGAAGTCCACCCTGCTGTCATTGCAGCCGTAAAACCAC
TTAGTTCCGGCAATATTCTTCAGGAAAGCCCAAGCAAAAAAGCAGCTGTGGCTGCTGTTCCAGTTCTCTCTGAGGATAAA
CCAGTCACTGTGTCTGAGACAGAAAAAACTCCAAACAGGTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000058673 ortholog_one2one 2 retrogenes
retro_hsap_3481, retro_hsap_508,
Mus musculus ENSMUSG00000026464 ortholog_one2one 2 retrogenes
retro_mmus_3323, retro_mmus_564,
Otolemur garnettii ENSOGAG00000000243 ortholog_one2one 1 retrogene
retro_ogar_3250,
Pan troglodytes ENSPTRG00000001876 ortholog_one2one 5 retrogenes
retro_ptro_2980, retro_ptro_2981, retro_ptro_2991, retro_ptro_380, retro_ptro_382,
Rattus norvegicus ENSRNOG00000002993 ortholog_one2many 3 retrogenes
retro_rnor_1570, retro_rnor_1673, retro_rnor_602,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1449 93.23 88.27
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Download FASTA sequences of all ENSMODG00000001184 retrocopies